fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44210.1 VEPRRELNLDLNLAPP at 185/200 in AT5G44210.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022250 MPIPPSLELDLFHRAA in 133/236 AT5G44210.1 1st_1st 0.276657060 Ib
KKAIAFDLDLNCPPPMEV in 224/236
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G44210.1     MAPRQ--------ANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPG
Os022250_Os05t0 MAPRTSDKTMSPAAAATGLALGVGGVAGAAAVGTGQ---HFRGVRKRPWGRYAAEIRDPA
                ****         * . .:*:. ** . : :: * :   ********************.

AT5G44210.1     KKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLP--GESTTVNDGGENDSYV---
Os022250_Os05t0 KKSRVWLGTFDTAEEAARAYDAAAREYRGAKAKTNFPYPNGAPAAGVNSGSSNSSTVESF
                **:******************:****:**:******* *  . :: **.*..*.* *   

AT5G44210.1     ----------------------NRTTVTTAREMTRQRFPFACHRERKVVGGY-ASAGFFF
Os022250_Os05t0 GSDVQAPMKAMPIPPSLELDLFHRAAAAAAAGAGGMRFPFE---------GYPVSHPYYF
                                      :*::.::*      ****          ** .*  ::*

AT5G44210.1     DPSRAASLRAELSRVCPVRFDPVNIEL-------SIGIRETVKVEP----RRELNLDLNL
Os022250_Os05t0 FGQAAAAAAASGCRMLKIAPAPVTVAALAQSDSDSSSIVDLAPSPPAALAKKAIAFDLDL
                  . **:  *. .*:  :   **.:         * .* : .   *    :: : :**:*

AT5G44210.1     -APPVVDV
Os022250_Os05t0 NCPPPMEV
                 .** ::*
BoxShade v3.31 C (beta, 970507) Output
AT5G44210.1     M A P R Q - - - - - - - - A N G R S I A V S E G G G G K T M T M T T M R K E V H F R G V R K R P W G R Y A A E I R D P G
Os022250_Os05t0    M A P R T S D K T M S P A A A A T G L A L G V G G V A G A A A V G T G Q - - - H F R G V R K R P W G R Y A A E I R D P A
 
AT5G44210.1     K K T R V W L G T F D T A E E A A R A Y D T A A R E F R G S K A K T N F P L P - - G E S T T V N D G G E N D S Y V - - -
Os022250_Os05t0    K K S R V W L G T F D T A E E A A R A Y D A A A R E Y R G A K A K T N F P Y P N G A P A A G V N S G S S N S S T V E S F
 
AT5G44210.1     - - - - - - - - - - - - - - - - - - - - - - N R T T V T T A R E M T R Q R F P F A C H R E R K V V G G Y - A S A G F F F
Os022250_Os05t0    G S D V Q A P M K A M P I P P S L E L D L F H R A A A A A A A G A G G M R F P F E - - - - - - - - - G Y P V S H P Y Y F
 
AT5G44210.1     D P S R A A S L R A E L S R V C P V R F D P V N I E L - - - - - - - S I G I R E T V K V E P - - - - R R E L N L D L N L
Os022250_Os05t0    F G Q A A A A A A A S G C R M L K I A P A P V T V A A L A Q S D S D S S S I V D L A P S P P A A L A K K A I A F D L D L
 
AT5G44210.1     - A P P V V D V
Os022250_Os05t0    N C P P P M E V
 
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