fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44210.1 VEPRRELNLDLNLAPP at 185/200 in AT5G44210.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016536 CQPKRELNLDLNLAPP in 195/208 AT5G44210.1 1st_1st 0.351585014 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G44210.1     MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLG
gm016536_Glyma0 MVKEKKN---VVV------KNKKPNNNADELHFRGVRKRPWGRYAAEIRDPGKKTRVWLG
                *. .: *   :.*      *. . ..  .*:*****************************

AT5G44210.1     TFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTTVNDGGENDSYVNR-----------
gm016536_Glyma0 TFDTAEDAARAYDAAARNFRGPKAKTNFPVPPD-----DNNNNNVNVNKNKSVNVKSHSP
                ******:******:***:***.*******:* :     *..:*:  **:           

AT5G44210.1     ---TTVTTA---REMTRQ-------RFPFACHRERKVVGGYASAG----FFFDPSRAASL
gm016536_Glyma0 SQSSTVESATPEREATRRSTSAAIDRFPFLPIQQQILMTHPVAAPMRPVFFLD-------
                   :** :*   ** **:       ****   ::: ::   .:*     **:*       

AT5G44210.1     RAE-LSRVCPVRFDPVNIEL-SIGIRETVKVEPRRELNLDLNLAPPVVDV
gm016536_Glyma0 RAHFMTQSFPLRFEPGPVQSDSDSSSVVVDCQPKRELNLDLNLAPPNEY-
                **. :::  *:**:*  ::  * .   .*. :*:************
BoxShade v3.31 C (beta, 970507) Output
AT5G44210.1     M A P R Q A N G R S I A V S E G G G G K T M T M T T M R K E V H F R G V R K R P W G R Y A A E I R D P G K K T R V W L G
gm016536_Glyma0    M V K E K K N - - - V V V - - - - - - K N K K P N N N A D E L H F R G V R K R P W G R Y A A E I R D P G K K T R V W L G
 
AT5G44210.1     T F D T A E E A A R A Y D T A A R E F R G S K A K T N F P L P G E S T T V N D G G E N D S Y V N R - - - - - - - - - - -
gm016536_Glyma0    T F D T A E D A A R A Y D A A A R N F R G P K A K T N F P V P P D - - - - - D N N N N N V N V N K N K S V N V K S H S P
 
AT5G44210.1     - - - T T V T T A - - - R E M T R Q - - - - - - - R F P F A C H R E R K V V G G Y A S A G - - - - F F F D P S R A A S L
gm016536_Glyma0    S Q S S T V E S A T P E R E A T R R S T S A A I D R F P F L P I Q Q Q I L M T H P V A A P M R P V F F L D - - - - - - -
 
AT5G44210.1     R A E - L S R V C P V R F D P V N I E L - S I G I R E T V K V E P R R E L N L D L N L A P P V V D V
gm016536_Glyma0    R A H F M T Q S F P L R F E P G P V Q S D S D S S S V V V D C Q P K R E L N L D L N L A P P N E Y -
 
0