fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G44260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034285 not found in 392aa AT1G03790.1 1st_not 0.403654485 II
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G44260.1     ---MDVEHHK---SGHISRPT-----VDIPPRKLLSSAKSP--------SSVSSPLRDYK
gm034285_Glyma1 MSSVCAKQHKFYPSHQLLSPKKTLREIDIPPRKLLTRRAAACVGGTDVYSSEETMLQKFL
                   : .::**   * ::  *.     :********:   :.        ** .: *:.: 

AT5G44260.1     EQKDYCYDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHY
gm034285_Glyma1 PSN----DSDEDDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYHY
                 .:    ***.:***:.*****:***:****************:*************:**

AT5G44260.1     TGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQ
gm034285_Glyma1 SGTVCPEYPR-GGCSRGDACEYAHGVFECWLHPSRYRTEACKDGRNCKRKVCFFAHTPRQ
                :* ****:.* *.***** * :**********************::**********:***

AT5G44260.1     LRVLPPSPENHISGGCGGSPSSS--------------PASVLSNKNNRCCLFC------S
gm034285_Glyma1 LRILPVTTS---------SPSSNDMPCKKNLNKLLNHASKSNNNNNNNCCLFCHCGASSS
                **:** :..         ****.              .:.  .*:**.*****      *

AT5G44260.1     HSPTSTLLNLSR-------SPSSSPPLSPADKADAFSRLS--RRRTAV------------
gm034285_Glyma1 VSPTSTLFGMSHFSPPVSPSSSSSPPPSPLKPRSVVSPISPISRYSAVNMNPHHGVVSYK
                 ******:.:*:       *.***** ** .  ...* :*   * :**            

AT5G44260.1     --LNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNLSSNHHHHRLP--PWLDVG
gm034285_Glyma1 DMFAELVNSLEGLSFNEG----------SPVSGA---------------KAPNFPWLDVS
                  : **:.**:.**:.*.           *:* *               : *  *****.

AT5G44260.1     DRDLQLQQSSPL------------RFALSPSSTPSYLHGQLQPPPSSFFGDEFTPRGGRL
gm034285_Glyma1 LEE-QQQQQNPFIVSSFGCEDKQNQFIFSPPSIQTPTNGKF--CRNRFMGNDNKVVGG--
                 .: * **..*:            :* :**.*  :  :*::    . *:*:: .  **  

AT5G44260.1     SDFSVAAAAAAQARDKNSFEVGSSGDLDLGWVNDLLT
gm034285_Glyma1 -------------ADVNG--------PDLAWVNELLM
                              * *.         **.***:**
BoxShade v3.31 C (beta, 970507) Output
AT5G44260.1     - - - M D V E H H K - - - S G H I S R P T - - - - - V D I P P R K L L S S A K S P - - - - - - - - S S V S S P L R D Y K
gm034285_Glyma1    M S S V C A K Q H K F Y P S H Q L L S P K K T L R E I D I P P R K L L T R R A A A C V G G T D V Y S S E E T M L Q K F L
 
AT5G44260.1     E Q K D Y C Y D S D S E D P Y A G D H F R M Y E F K I R R C T R S R S H D W T D C P F S H P G E K A R R R D P R R F H Y
gm034285_Glyma1    P S N - - - - D S D E D D P Y S S D H F R M F E F K V R R C T R S R S H D W T D C P F A H P G E K A R R R D P R R Y H Y
 
AT5G44260.1     T G E V C P E F S R H G D C S R G D E C G F A H G V F E C W L H P S R Y R T E A C K D G K H C K R K V C F F A H S P R Q
gm034285_Glyma1    S G T V C P E Y P R - G G C S R G D A C E Y A H G V F E C W L H P S R Y R T E A C K D G R N C K R K V C F F A H T P R Q
 
AT5G44260.1     L R V L P P S P E N H I S G G C G G S P S S S - - - - - - - - - - - - - - P A S V L S N K N N R C C L F C - - - - - - S
gm034285_Glyma1    L R I L P V T T S - - - - - - - - - S P S S N D M P C K K N L N K L L N H A S K S N N N N N N N C C L F C H C G A S S S
 
AT5G44260.1     H S P T S T L L N L S R - - - - - - - S P S S S P P L S P A D K A D A F S R L S - - R R R T A V - - - - - - - - - - - -
gm034285_Glyma1    V S P T S T L F G M S H F S P P V S P S S S S S P P P S P L K P R S V V S P I S P I S R Y S A V N M N P H H G V V S Y K
 
AT5G44260.1     - - L N E L I S S L D S L S L T E A L A A S S S S P V T M P I S T A T M I A S S N L S S N H H H H R L P - - P W L D V G
gm034285_Glyma1    D M F A E L V N S L E G L S F N E G - - - - - - - - - - S P V S G A - - - - - - - - - - - - - - - K A P N F P W L D V S
 
AT5G44260.1     D R D L Q L Q Q S S P L - - - - - - - - - - - - R F A L S P S S T P S Y L H G Q L Q P P P S S F F G D E F T P R G G R L
gm034285_Glyma1    L E E - Q Q Q Q Q N P F I V S S F G C E D K Q N Q F I F S P P S I Q T P T N G K F - - C R N R F M G N D N K V V G G - -
 
AT5G44260.1     S D F S V A A A A A A Q A R D K N S F E V G S S G D L D L G W V N D L L T
gm034285_Glyma1    - - - - - - - - - - - - - A D V N G - - - - - - - - P D L A W V N E L L M
 
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