Input
| Putative repression domain
|
|
AT5G45420.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt030147 |
not found in 140aa |
AT5G45420.1 |
1st_1st |
0.299595141 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G45420.1 MDFFDEDRPRFVFQSRPSSSHTAEEEEEARIPNKLFISISVSISLIILSLSFFYFESEPA
pt030147_POPTR_ ------------------------------------------------------------
AT5G45420.1 KSLLLWLSLSFLVGPFAPSSLTGGKIRVGYGQILEPEQIHDESSTDNERESRRKSVNKRS
pt030147_POPTR_ ------------------------------------------------------------
AT5G45420.1 KGSTKSDNPPENASAVTEVSRKVVIPQSKESGSVNETKDWTAEEIEILKKQLIKHPAGKP
pt030147_POPTR_ ---------------------------------------------------MVKNPVGKP
::*:*.***
AT5G45420.1 GRWETVASAFGGRYKTENVIKKAKEIGEKKIYESDDYAQFLKNRKASDPRLVDENEENSG
pt030147_POPTR_ RRWEVIAEAFNGRYRVESVIKKAKELGEKKMDDSDSYARFLKNRKPLDTR------AESG
***.:*.**.***:.*.*******:****: :**.**:******. *.* :**
AT5G45420.1 AGG--DAEGTKEI-----WSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAACMKR
pt030147_POPTR_ SQGLESDESGQEVGGGLGWTTGEDIALLNALKVFSKDVAMRWEKIAAAVPGKSKAACMKR
: * . *. :*: *:.***********.*.*:.**********************
AT5G45420.1 VTELKKGFRSSKTPAN-
pt030147_POPTR_ VTELKKDFRSSKAGSES
******.*****: ::
BoxShade v3.31 C (beta, 970507) Output
AT5G45420.1 |
M |
D |
F |
F |
D |
E |
D |
R |
P |
R |
F |
V |
F |
Q |
S |
R |
P |
S |
S |
S |
H |
T |
A |
E |
E |
E |
E |
E |
A |
R |
I |
P |
N |
K |
L |
F |
I |
S |
I |
S |
V |
S |
I |
S |
L |
I |
I |
L |
S |
L |
S |
F |
F |
Y |
F |
E |
S |
E |
P |
A |
pt030147_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT5G45420.1 |
K |
S |
L |
L |
L |
W |
L |
S |
L |
S |
F |
L |
V |
G |
P |
F |
A |
P |
S |
S |
L |
T |
G |
G |
K |
I |
R |
V |
G |
Y |
G |
Q |
I |
L |
E |
P |
E |
Q |
I |
H |
D |
E |
S |
S |
T |
D |
N |
E |
R |
E |
S |
R |
R |
K |
S |
V |
N |
K |
R |
S |
pt030147_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT5G45420.1 |
K |
G |
S |
T |
K |
S |
D |
N |
P |
P |
E |
N |
A |
S |
A |
V |
T |
E |
V |
S |
R |
K |
V |
V |
I |
P |
Q |
S |
K |
E |
S |
G |
S |
V |
N |
E |
T |
K |
D |
W |
T |
A |
E |
E |
I |
E |
I |
L |
K |
K |
Q |
L |
I |
K |
H |
P |
A |
G |
K |
P |
pt030147_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
V |
K |
N |
P |
V |
G |
K |
P |
|
AT5G45420.1 |
G |
R |
W |
E |
T |
V |
A |
S |
A |
F |
G |
G |
R |
Y |
K |
T |
E |
N |
V |
I |
K |
K |
A |
K |
E |
I |
G |
E |
K |
K |
I |
Y |
E |
S |
D |
D |
Y |
A |
Q |
F |
L |
K |
N |
R |
K |
A |
S |
D |
P |
R |
L |
V |
D |
E |
N |
E |
E |
N |
S |
G |
pt030147_POPTR_ |
R |
R |
W |
E |
V |
I |
A |
E |
A |
F |
N |
G |
R |
Y |
R |
V |
E |
S |
V |
I |
K |
K |
A |
K |
E |
L |
G |
E |
K |
K |
M |
D |
D |
S |
D |
S |
Y |
A |
R |
F |
L |
K |
N |
R |
K |
P |
L |
D |
T |
R |
- |
- |
- |
- |
- |
- |
A |
E |
S |
G |
|
AT5G45420.1 |
A |
G |
G |
- |
- |
D |
A |
E |
G |
T |
K |
E |
I |
- |
- |
- |
- |
- |
W |
S |
N |
G |
E |
D |
I |
A |
L |
L |
N |
A |
L |
K |
A |
F |
P |
K |
E |
A |
A |
M |
R |
W |
E |
K |
I |
A |
A |
A |
V |
P |
G |
K |
S |
K |
A |
A |
C |
M |
K |
R |
pt030147_POPTR_ |
S |
Q |
G |
L |
E |
S |
D |
E |
S |
G |
Q |
E |
V |
G |
G |
G |
L |
G |
W |
T |
T |
G |
E |
D |
I |
A |
L |
L |
N |
A |
L |
K |
V |
F |
S |
K |
D |
V |
A |
M |
R |
W |
E |
K |
I |
A |
A |
A |
V |
P |
G |
K |
S |
K |
A |
A |
C |
M |
K |
R |
|
AT5G45420.1 |
V |
T |
E |
L |
K |
K |
G |
F |
R |
S |
S |
K |
T |
P |
A |
N |
- |
pt030147_POPTR_ |
V |
T |
E |
L |
K |
K |
D |
F |
R |
S |
S |
K |
A |
G |
S |
E |
S |
|
|