fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G45420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030147 not found in 140aa AT5G45420.1 1st_1st 0.299595141 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G45420.1     MDFFDEDRPRFVFQSRPSSSHTAEEEEEARIPNKLFISISVSISLIILSLSFFYFESEPA
pt030147_POPTR_ ------------------------------------------------------------
                                                                            

AT5G45420.1     KSLLLWLSLSFLVGPFAPSSLTGGKIRVGYGQILEPEQIHDESSTDNERESRRKSVNKRS
pt030147_POPTR_ ------------------------------------------------------------
                                                                            

AT5G45420.1     KGSTKSDNPPENASAVTEVSRKVVIPQSKESGSVNETKDWTAEEIEILKKQLIKHPAGKP
pt030147_POPTR_ ---------------------------------------------------MVKNPVGKP
                                                                   ::*:*.***

AT5G45420.1     GRWETVASAFGGRYKTENVIKKAKEIGEKKIYESDDYAQFLKNRKASDPRLVDENEENSG
pt030147_POPTR_ RRWEVIAEAFNGRYRVESVIKKAKELGEKKMDDSDSYARFLKNRKPLDTR------AESG
                 ***.:*.**.***:.*.*******:****: :**.**:******. *.*       :**

AT5G45420.1     AGG--DAEGTKEI-----WSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAACMKR
pt030147_POPTR_ SQGLESDESGQEVGGGLGWTTGEDIALLNALKVFSKDVAMRWEKIAAAVPGKSKAACMKR
                : *  . *. :*:     *:.***********.*.*:.**********************

AT5G45420.1     VTELKKGFRSSKTPAN-
pt030147_POPTR_ VTELKKDFRSSKAGSES
                ******.*****: ::
BoxShade v3.31 C (beta, 970507) Output
AT5G45420.1     M D F F D E D R P R F V F Q S R P S S S H T A E E E E E A R I P N K L F I S I S V S I S L I I L S L S F F Y F E S E P A
pt030147_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G45420.1     K S L L L W L S L S F L V G P F A P S S L T G G K I R V G Y G Q I L E P E Q I H D E S S T D N E R E S R R K S V N K R S
pt030147_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G45420.1     K G S T K S D N P P E N A S A V T E V S R K V V I P Q S K E S G S V N E T K D W T A E E I E I L K K Q L I K H P A G K P
pt030147_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V K N P V G K P
 
AT5G45420.1     G R W E T V A S A F G G R Y K T E N V I K K A K E I G E K K I Y E S D D Y A Q F L K N R K A S D P R L V D E N E E N S G
pt030147_POPTR_    R R W E V I A E A F N G R Y R V E S V I K K A K E L G E K K M D D S D S Y A R F L K N R K P L D T R - - - - - - A E S G
 
AT5G45420.1     A G G - - D A E G T K E I - - - - - W S N G E D I A L L N A L K A F P K E A A M R W E K I A A A V P G K S K A A C M K R
pt030147_POPTR_    S Q G L E S D E S G Q E V G G G L G W T T G E D I A L L N A L K V F S K D V A M R W E K I A A A V P G K S K A A C M K R
 
AT5G45420.1     V T E L K K G F R S S K T P A N -
pt030147_POPTR_    V T E L K K D F R S S K A G S E S
 
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