Input
| Putative repression domain
|
|
AT5G45580.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt010779 |
not found in 279aa |
AT5G45580.1 |
1st_1st |
0.399628252 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G45580.1 --------------------MMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLK
pt010779_POPTR_ MEKTTFGGGGGSYPYENGVVMMTRDPRPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLR
******:*****************:****.*********:
AT5G45580.1 LMGLKGLTLYHLKSHLQKYRLGQQQGKKQNRTEQNKEN-----AGSSYVHFDNCSQGGIS
pt010779_POPTR_ LMGLKGLTLYHLKSHLQKYRLG-QQARRQNNTEQSKESRVRAPQGQAPVH-----QESMK
********************** **.::**.***.**. *.: ** * .:.
AT5G45580.1 NDSRFDNHQRQSGNVPFAEAMRHQVDAQQRFQEQLEVQKKLQMRMEAQGKYLLTLLEKAQ
pt010779_POPTR_ N-------KVQYREISVAEALNCQIEVQKTLQEKLEVQKKLQMRIEAQGKYLQAILEKAQ
* : * ::..***:. *::.*: :**:**********:******* ::*****
AT5G45580.1 KSLPCGNAGETDKGQ-------FSDFNLALSGLVGSDRKNEKAGLVTDISHLNGGDSSQE
pt010779_POPTR_ KSLS-QNLNDDSNGKLKATRAHLTGFNSAVYSLMENLNAEDRKPSITDLKGINMKENGPA
***. * .: .:*: ::.** *: .*: . . ::: :**:. :* :..
AT5G45580.1 FRLCGEQEKIETGDACVKPESGFVHFDLNSKSGYDLLNCGKYGIEVKPNVIGDRLQ
pt010779_POPTR_ MHIQREGQTQETKDVKHHLQGDSINFDLNTKGNYDFVSAN--GSELELKMLSYRR-
::: * :. ** *. : :.. ::****:*..**::... * *:: :::. *
BoxShade v3.31 C (beta, 970507) Output
AT5G45580.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
M |
T |
R |
D |
P |
K |
P |
R |
L |
R |
W |
T |
A |
D |
L |
H |
D |
R |
F |
V |
D |
A |
V |
A |
K |
L |
G |
G |
A |
D |
K |
A |
T |
P |
K |
S |
V |
L |
K |
pt010779_POPTR_ |
M |
E |
K |
T |
T |
F |
G |
G |
G |
G |
G |
S |
Y |
P |
Y |
E |
N |
G |
V |
V |
M |
M |
T |
R |
D |
P |
R |
P |
R |
L |
R |
W |
T |
A |
D |
L |
H |
D |
R |
F |
V |
D |
A |
V |
T |
K |
L |
G |
G |
P |
D |
K |
A |
T |
P |
K |
S |
V |
L |
R |
|
AT5G45580.1 |
L |
M |
G |
L |
K |
G |
L |
T |
L |
Y |
H |
L |
K |
S |
H |
L |
Q |
K |
Y |
R |
L |
G |
Q |
Q |
Q |
G |
K |
K |
Q |
N |
R |
T |
E |
Q |
N |
K |
E |
N |
- |
- |
- |
- |
- |
A |
G |
S |
S |
Y |
V |
H |
F |
D |
N |
C |
S |
Q |
G |
G |
I |
S |
pt010779_POPTR_ |
L |
M |
G |
L |
K |
G |
L |
T |
L |
Y |
H |
L |
K |
S |
H |
L |
Q |
K |
Y |
R |
L |
G |
- |
Q |
Q |
A |
R |
R |
Q |
N |
N |
T |
E |
Q |
S |
K |
E |
S |
R |
V |
R |
A |
P |
Q |
G |
Q |
A |
P |
V |
H |
- |
- |
- |
- |
- |
Q |
E |
S |
M |
K |
|
AT5G45580.1 |
N |
D |
S |
R |
F |
D |
N |
H |
Q |
R |
Q |
S |
G |
N |
V |
P |
F |
A |
E |
A |
M |
R |
H |
Q |
V |
D |
A |
Q |
Q |
R |
F |
Q |
E |
Q |
L |
E |
V |
Q |
K |
K |
L |
Q |
M |
R |
M |
E |
A |
Q |
G |
K |
Y |
L |
L |
T |
L |
L |
E |
K |
A |
Q |
pt010779_POPTR_ |
N |
- |
- |
- |
- |
- |
- |
- |
K |
V |
Q |
Y |
R |
E |
I |
S |
V |
A |
E |
A |
L |
N |
C |
Q |
I |
E |
V |
Q |
K |
T |
L |
Q |
E |
K |
L |
E |
V |
Q |
K |
K |
L |
Q |
M |
R |
I |
E |
A |
Q |
G |
K |
Y |
L |
Q |
A |
I |
L |
E |
K |
A |
Q |
|
AT5G45580.1 |
K |
S |
L |
P |
C |
G |
N |
A |
G |
E |
T |
D |
K |
G |
Q |
- |
- |
- |
- |
- |
- |
- |
F |
S |
D |
F |
N |
L |
A |
L |
S |
G |
L |
V |
G |
S |
D |
R |
K |
N |
E |
K |
A |
G |
L |
V |
T |
D |
I |
S |
H |
L |
N |
G |
G |
D |
S |
S |
Q |
E |
pt010779_POPTR_ |
K |
S |
L |
S |
- |
Q |
N |
L |
N |
D |
D |
S |
N |
G |
K |
L |
K |
A |
T |
R |
A |
H |
L |
T |
G |
F |
N |
S |
A |
V |
Y |
S |
L |
M |
E |
N |
L |
N |
A |
E |
D |
R |
K |
P |
S |
I |
T |
D |
L |
K |
G |
I |
N |
M |
K |
E |
N |
G |
P |
A |
|
AT5G45580.1 |
F |
R |
L |
C |
G |
E |
Q |
E |
K |
I |
E |
T |
G |
D |
A |
C |
V |
K |
P |
E |
S |
G |
F |
V |
H |
F |
D |
L |
N |
S |
K |
S |
G |
Y |
D |
L |
L |
N |
C |
G |
K |
Y |
G |
I |
E |
V |
K |
P |
N |
V |
I |
G |
D |
R |
L |
Q |
pt010779_POPTR_ |
M |
H |
I |
Q |
R |
E |
G |
Q |
T |
Q |
E |
T |
K |
D |
V |
K |
H |
H |
L |
Q |
G |
D |
S |
I |
N |
F |
D |
L |
N |
T |
K |
G |
N |
Y |
D |
F |
V |
S |
A |
N |
- |
- |
G |
S |
E |
L |
E |
L |
K |
M |
L |
S |
Y |
R |
R |
- |
|
|