fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G45580.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000247 not found in 255aa AT5G45580.1 1st_1st 0.431226765 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G45580.1     MMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYR
gm000247_Glyma0 -MTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYR
                 ***********************:****.*********:********************

AT5G45580.1     LGQQQGKKQNRTEQNKENAGSSYVHFDNCSQGGISNDS-RFDNHQRQSGNVPFAEAMRHQ
gm000247_Glyma0 LG-QQAQKQNE-EVHKENSRCSYVNFSNRSLA--PNTSYRGDD---EGGEIPIAEALRCQ
                ** **.:***. * :***: .***:*.* * .  .* * * *:   :.*::*:***:* *

AT5G45580.1     VDAQQRFQEQLEVQKKLQMRMEAQGKYLLTLLEKAQKSLPCGNAG--ETDKGQFSDFNLA
gm000247_Glyma0 IEVQKRLEEQLKVQKKLQMRIEAQGKYLQSVLEKAQRSLSLDGPGSLEASRAELTEFNSA
                ::.*:*::***:********:******* ::*****:**. ...*  *:.:.::::** *

AT5G45580.1     LSGLVGSDRKNEKAGLVTDISHLNGGDSSQEF---RLCGEQEKIETGDACVKPESGFVHF
gm000247_Glyma0 LSNFMENMNKDSKQNII-EVNNFYSKSHGSAFYNQEVGREQNR----DQKPKVEGGSIQF
                **.:: . .*:.* .:: ::.:: . . .. *   .:  **::    *   * *.* ::*

AT5G45580.1     DLNSKSGYDLLNCGKYGIEVKPNVIGD-RLQ
gm000247_Glyma0 DLNIKGSNDLVSAG--GAEMDANMVSSYRV-
                *** *.. **:..*  * *:..*::.. *:
BoxShade v3.31 C (beta, 970507) Output
AT5G45580.1     M M T R D P K P R L R W T A D L H D R F V D A V A K L G G A D K A T P K S V L K L M G L K G L T L Y H L K S H L Q K Y R
gm000247_Glyma0    - M T R D P K P R L R W T A D L H D R F V D A V T K L G G P D K A T P K S V L R L M G L K G L T L Y H L K S H L Q K Y R
 
AT5G45580.1     L G Q Q Q G K K Q N R T E Q N K E N A G S S Y V H F D N C S Q G G I S N D S - R F D N H Q R Q S G N V P F A E A M R H Q
gm000247_Glyma0    L G - Q Q A Q K Q N E - E V H K E N S R C S Y V N F S N R S L A - - P N T S Y R G D D - - - E G G E I P I A E A L R C Q
 
AT5G45580.1     V D A Q Q R F Q E Q L E V Q K K L Q M R M E A Q G K Y L L T L L E K A Q K S L P C G N A G - - E T D K G Q F S D F N L A
gm000247_Glyma0    I E V Q K R L E E Q L K V Q K K L Q M R I E A Q G K Y L Q S V L E K A Q R S L S L D G P G S L E A S R A E L T E F N S A
 
AT5G45580.1     L S G L V G S D R K N E K A G L V T D I S H L N G G D S S Q E F - - - R L C G E Q E K I E T G D A C V K P E S G F V H F
gm000247_Glyma0    L S N F M E N M N K D S K Q N I I - E V N N F Y S K S H G S A F Y N Q E V G R E Q N R - - - - D Q K P K V E G G S I Q F
 
AT5G45580.1     D L N S K S G Y D L L N C G K Y G I E V K P N V I G D - R L Q
gm000247_Glyma0    D L N I K G S N D L V S A G - - G A E M D A N M V S S Y R V -
 
0