fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G45710.1 VLGKPGLSLNLENHER at 92/249 in AT5G45710.2
VLGKPGLSLNLENHER at 188/345 in AT5G45710.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025686 not found in 406aa AT4G18880.1 not_not 0.546564885 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G45710.1     MDENNGGSSSLPPFLTKTYEMVDDSSSDSVVAWSENNKSFIVKNPAEFSRDLLPRFFKHK
pt025686_POPTR_ MDESQGTSNSLPPFLAKAYEMVDDPSSDSIVSWSQNNKSFVVWNPPEFARDLLPRFFKHN
                ***.:* *.******:*:******.****:*:**:*****:* **.**:**********:

AT5G45710.1     NFSSFIRQLNTYGFRKVDPEKWEFLNDDFVRGRPYLMKNIHRRKPVHSHSLVNLQAQ--N
pt025686_POPTR_ NFSSFIRQLNTYGFRKIDPEQWEFANEDFIRGQPHLMKNIHRRKPVHSHSMQNLQGQGSN
                ****************:***:*** *:**:**:*:***************: ***.*  *

AT5G45710.1     PLTESERRSMEDQIERLKNEKEGLLAELQNQEQERKEFELQVTTLKDRLQHMEQHQKSIV
pt025686_POPTR_ LLTDSERQSMKDDIEKLKRDKQALILELQKQEQERKGFEMQIEGLKEKLQQTECIQQTIV
                 **:***:**:*:**:**.:*:.*: ***:****** **:*:  **::**: *  *::**

AT5G45710.1     AYVSQVLGKPGLSLN----LENHERRKR-----------RFQENSLPPSSS---------
pt025686_POPTR_ SFVARVLPKPGLALNIMPQLEGRDRKRRLPRIGYLYSEASNEDNQMVTSQALSRENADSN
                ::*::** ****:**    **.::*::*             ::*.: .*.:         

AT5G45710.1     -----HIEQVEKLESSLTFWENLVSESCEKSGLQSSSMDHDAAES---SLSIG------D
pt025686_POPTR_ SVALLNMEQFEQLESSLTFWENMVHDIGQTYNYNNSTIEMDDSTSGAQSPAISCVHLNVD
                     ::**.*:**********:* :  :. . :.*::: * : *   * :*.      *

AT5G45710.1     TRPKSSKIDMNSEPPVTV-------------TAPAPKTGVNDDFWEQCLTENPGSTEQQE
pt025686_POPTR_ FRPKSPGIDMNSEPSAAVAPEPVSPKEQLAGTAPTVATGVNDVFWEQFLTENPGSTNAQE
                 ****. *******..:*             ***:  ***** **** ********: **

AT5G45710.1     VQSERRDVGNDNNGNKIGNQRTYWWNSGNVNNITEKAS--------
pt025686_POPTR_ VQSERKDSDGRKGEIKPVDPGKFWWNMRNVNNLTEQMGHLTPAERT
                *****:* .. :.  *  :  .:***  ****:**: .
BoxShade v3.31 C (beta, 970507) Output
AT5G45710.1     M D E N N G G S S S L P P F L T K T Y E M V D D S S S D S V V A W S E N N K S F I V K N P A E F S R D L L P R F F K H K
pt025686_POPTR_    M D E S Q G T S N S L P P F L A K A Y E M V D D P S S D S I V S W S Q N N K S F V V W N P P E F A R D L L P R F F K H N
 
AT5G45710.1     N F S S F I R Q L N T Y G F R K V D P E K W E F L N D D F V R G R P Y L M K N I H R R K P V H S H S L V N L Q A Q - - N
pt025686_POPTR_    N F S S F I R Q L N T Y G F R K I D P E Q W E F A N E D F I R G Q P H L M K N I H R R K P V H S H S M Q N L Q G Q G S N
 
AT5G45710.1     P L T E S E R R S M E D Q I E R L K N E K E G L L A E L Q N Q E Q E R K E F E L Q V T T L K D R L Q H M E Q H Q K S I V
pt025686_POPTR_    L L T D S E R Q S M K D D I E K L K R D K Q A L I L E L Q K Q E Q E R K G F E M Q I E G L K E K L Q Q T E C I Q Q T I V
 
AT5G45710.1     A Y V S Q V L G K P G L S L N - - - - L E N H E R R K R - - - - - - - - - - - R F Q E N S L P P S S S - - - - - - - - -
pt025686_POPTR_    S F V A R V L P K P G L A L N I M P Q L E G R D R K R R L P R I G Y L Y S E A S N E D N Q M V T S Q A L S R E N A D S N
 
AT5G45710.1     - - - - - H I E Q V E K L E S S L T F W E N L V S E S C E K S G L Q S S S M D H D A A E S - - - S L S I G - - - - - - D
pt025686_POPTR_    S V A L L N M E Q F E Q L E S S L T F W E N M V H D I G Q T Y N Y N N S T I E M D D S T S G A Q S P A I S C V H L N V D
 
AT5G45710.1     T R P K S S K I D M N S E P P V T V - - - - - - - - - - - - - T A P A P K T G V N D D F W E Q C L T E N P G S T E Q Q E
pt025686_POPTR_    F R P K S P G I D M N S E P S A A V A P E P V S P K E Q L A G T A P T V A T G V N D V F W E Q F L T E N P G S T N A Q E
 
AT5G45710.1     V Q S E R R D V G N D N N G N K I G N Q R T Y W W N S G N V N N I T E K A S - - - - - - - -
pt025686_POPTR_    V Q S E R K D S D G R K G E I K P V D P G K F W W N M R N V N N L T E Q M G H L T P A E R T
 
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