fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047190 not found in 302aa AT4G17980.1 1st_not 0.5 II
Pt032744 not found in 371aa AT4G17980.1 1st_not 0.498366013 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G46590.1     MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNR
pt032744_POPTR_ MGGASLPPGFRFHPTDEELVGYYLQRKAQGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
gm047190_Glyma1 MGGATLPPGFRFHPTDEELVGYYLKRKVEGIEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.: **************: ***:**.:*:*************.*******:*****:*

AT5G46590.1     DMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSS-SIIGYRKTLVFYKGRA
pt032744_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATKSGYWKATGKDRKVVCKS--AVTGYRKTLVFYRGRA
gm047190_Glyma1 DLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSNPSTVGYRKTLVFYLGRA
                *:**:***.**:***** ****.**:***********:..:*  :  ********* ***

AT5G46590.1     PLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIK-----------------
pt032744_POPTR_ PLGDRTDWVMHEYRLC-DDISQGSPNLKGAFALCHVVKKNEQGLKISDSQGEPKAKQVGS
gm047190_Glyma1 PLGDRTDWVMHEYRLC-DDLGQATPCFQGGFALCRVIKKNEKA-----------------
                *****::*:******* ** .*.:  ::*.*.**:*  ***                   

AT5G46590.1     -------TNTKIRK--------IPSEQTIGSGESSGLSSRVTSPSRDETMPFHSFANPVS
pt032744_POPTR_ SSSNVDFTSAVISNEPSNISFDMSSQASYLYNNESRYSSPITSPY--QVAPMSDFEPAAS
gm047190_Glyma1 ----------------------MSHSATL-----SRYSSPITSPY--NVAPMGEFNQASV
                                      :. . :      *  ** :***   :. *: .*  .  

AT5G46590.1     TETDSSNIWISPEFILDSSKDYPQIQDVASQCFQQDFDFPIIGN-----QNMEFPASTSL
pt032744_POPTR_ MESYPSSHWISPDLILDSSKDYSQVHETAAQYLPQ-YEYPISMNTWQPDRHREFSPGSSH
gm047190_Glyma1 ETTNPSNFWISPDMILDSSKDYSQLQNAMAECFPR-YDLPSVMAPWQSLEHPETSSSLSY
                  : .*. ****::********.*:::. :: : : :: *         .: * ... * 

AT5G46590.1     D------QNMDEFMQNGYWTNY-GY-DQTGLFGYSDFS----------------------
pt032744_POPTR_ SNFTGEIEPPDDLSHIGFMSPYSGHGNYLGFGGNDDMHYQGFEPRNQ----APICKQASG
gm047190_Glyma1 SNFNGEVEFADNLSQIGCTRQW----NSMDLYGNGDVPYDGYDQVNSISYPEPF------
                .      :  *:: : *    :    :  .: * .*.                       

AT5G46590.1     ---------------------
pt032744_POPTR_ DGSLGEYGGLWSQEDNMVIVI
gm047190_Glyma1 ---------------------
BoxShade v3.31 C (beta, 970507) Output
AT5G46590.1     M G S S C L P P G F R F H P T D E E L I E Y Y L K R K V E G L E I E L E V I P V I D L Y S F D P W E L P D K S F L P N R
pt032744_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L Q R K A Q G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
gm047190_Glyma1    M G G A T L P P G F R F H P T D E E L V G Y Y L K R K V E G I E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT5G46590.1     D M E W Y F F C S R D K K Y P N G F R T N R G T K A G Y W K A T G K D R K I T S R S S - S I I G Y R K T L V F Y K G R A
pt032744_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T K S G Y W K A T G K D R K V V C K S - - A V T G Y R K T L V F Y R G R A
gm047190_Glyma1    D L E W F F F C P R D R K Y P N G S R T N R A T K A G Y W K A T G K D R K V V C Q S N P S T V G Y R K T L V F Y L G R A
 
AT5G46590.1     P L G D R S N W I M H E Y R L C D D D T S Q G S Q N L K G A F V L C R V A M K N E I K - - - - - - - - - - - - - - - - -
pt032744_POPTR_    P L G D R T D W V M H E Y R L C - D D I S Q G S P N L K G A F A L C H V V K K N E Q G L K I S D S Q G E P K A K Q V G S
gm047190_Glyma1    P L G D R T D W V M H E Y R L C - D D L G Q A T P C F Q G G F A L C R V I K K N E K A - - - - - - - - - - - - - - - - -
 
AT5G46590.1     - - - - - - - T N T K I R K - - - - - - - - I P S E Q T I G S G E S S G L S S R V T S P S R D E T M P F H S F A N P V S
pt032744_POPTR_    S S S N V D F T S A V I S N E P S N I S F D M S S Q A S Y L Y N N E S R Y S S P I T S P Y - - Q V A P M S D F E P A A S
gm047190_Glyma1    - - - - - - - - - - - - - - - - - - - - - - M S H S A T L - - - - - S R Y S S P I T S P Y - - N V A P M G E F N Q A S V
 
AT5G46590.1     T E T D S S N I W I S P E F I L D S S K D Y P Q I Q D V A S Q C F Q Q D F D F P I I G N - - - - - Q N M E F P A S T S L
pt032744_POPTR_    M E S Y P S S H W I S P D L I L D S S K D Y S Q V H E T A A Q Y L P Q - Y E Y P I S M N T W Q P D R H R E F S P G S S H
gm047190_Glyma1    E T T N P S N F W I S P D M I L D S S K D Y S Q L Q N A M A E C F P R - Y D L P S V M A P W Q S L E H P E T S S S L S Y
 
AT5G46590.1     D - - - - - - Q N M D E F M Q N G Y W T N Y - G Y - D Q T G L F G Y S D F S - - - - - - - - - - - - - - - - - - - - - -
pt032744_POPTR_    S N F T G E I E P P D D L S H I G F M S P Y S G H G N Y L G F G G N D D M H Y Q G F E P R N Q - - - - A P I C K Q A S G
gm047190_Glyma1    S N F N G E V E F A D N L S Q I G C T R Q W - - - - N S M D L Y G N G D V P Y D G Y D Q V N S I S Y P E P F - - - - - -
 
AT5G46590.1     - - - - - - - - - - - - - - - - - - - - -
pt032744_POPTR_    D G S L G E Y G G L W S Q E D N M V I V I
gm047190_Glyma1    - - - - - - - - - - - - - - - - - - - - -
 
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