fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012084 not found in 330aa AT4G17980.1 not_not 0.475490196 III
Pt012227 not found in 321aa AT4G17980.1 not_not 0.470588235 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G46590.1     MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNR
pt012227_POPTR_ MGGASLPPGFRFHPTDEELVGYYLHRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
gm012084_Glyma0 MGGATLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKR
                **.: **************: ***:*****************:*.*******:*****:*

AT5G46590.1     DMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFYKGRAP
pt012227_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATQAGYWKATGKDRKVVCQ-SAVTGYRKTLVFYRGRAP
gm012084_Glyma0 DLEWFFFCPRDRKYPNGSRTNRATKAGYWKA--------------TGYRKTLVFYLGRAP
                *:**:***.**:***** ****.*:******               ********* ****

AT5G46590.1     LGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNE--IK----------------
pt012227_POPTR_ LGDRTDWVMHEYRLC-DDLSQGSPNFKGAFALCRVVKKNEQGLKMSDPQGEPKAKKVGSS
gm012084_Glyma0 MGDRTDWVMHEYRLC-DDLGQATPCFQGGFALCRVIKKN---VKASVSQGEHKGKRAGSS
                :***::*:******* ** .*.:  ::*.*.****  **   :*                

AT5G46590.1     ------TNTKIRKIPSEQTIG-SGESSGL-------SSRVTSPSRDETMPFHSFANPVST
pt012227_POPTR_ SSNVDFTSNVVSNEPSNISFGMSSQASYLYNNGNQYSTPIASPY--QVTTVSELEPAASL
gm012084_Glyma0 SINGSDTSVKFSSEPFSNSGDASSQASHL-NKESRYSSPITSPY--NVAPMGEYN-QASV
                      *.  . . * . : . *.::* *       *: ::**   :. .. .    .* 

AT5G46590.1     ETDSSNIWISPEFILDSSKDYPQIQDVASQCFQQDFDFPII------------------G
pt012227_POPTR_ ESNPPSHWISPELILDSSK----------------YEYPSSMNTWQPDTHGEFSPGSSYS
gm012084_Glyma0 ETNPSNFWISPDMILDSSKDYPPLQNAVAECF-PRYDLPSVMAPWQSLEHPETSSSLSYS
                *::... ****::******                :: *                    .

AT5G46590.1     NQNMEFPASTSLDQ-----------NMDEFMQNGYWTNYGYDQTGLFGYSDFS
pt012227_POPTR_ NFTGEIEHADDLSHIGFMSPYSEHGNYMGFGGNDDMHYQGY------------
gm012084_Glyma0 NFNVEVDFADSLSQIGCMSPYSRQWNSMDFYGNGNVPYDGYDQTNSISYPELF
                * . *.  : .*.:           *   *  *.     **
BoxShade v3.31 C (beta, 970507) Output
AT5G46590.1     M G S S C L P P G F R F H P T D E E L I E Y Y L K R K V E G L E I E L E V I P V I D L Y S F D P W E L P D K S F L P N R
pt012227_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L H R K V E G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
gm012084_Glyma0    M G G A T L P P G F R F H P T D E E L V G Y Y L K R K V E G L E I E L E V I P V I D F Y K F D P W E L P E K S F L P K R
 
AT5G46590.1     D M E W Y F F C S R D K K Y P N G F R T N R G T K A G Y W K A T G K D R K I T S R S S S I I G Y R K T L V F Y K G R A P
pt012227_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T Q A G Y W K A T G K D R K V V C Q - S A V T G Y R K T L V F Y R G R A P
gm012084_Glyma0    D L E W F F F C P R D R K Y P N G S R T N R A T K A G Y W K A - - - - - - - - - - - - - - T G Y R K T L V F Y L G R A P
 
AT5G46590.1     L G D R S N W I M H E Y R L C D D D T S Q G S Q N L K G A F V L C R V A M K N E - - I K - - - - - - - - - - - - - - - -
pt012227_POPTR_    L G D R T D W V M H E Y R L C - D D L S Q G S P N F K G A F A L C R V V K K N E Q G L K M S D P Q G E P K A K K V G S S
gm012084_Glyma0    M G D R T D W V M H E Y R L C - D D L G Q A T P C F Q G G F A L C R V I K K N - - - V K A S V S Q G E H K G K R A G S S
 
AT5G46590.1     - - - - - - T N T K I R K I P S E Q T I G - S G E S S G L - - - - - - - S S R V T S P S R D E T M P F H S F A N P V S T
pt012227_POPTR_    S S N V D F T S N V V S N E P S N I S F G M S S Q A S Y L Y N N G N Q Y S T P I A S P Y - - Q V T T V S E L E P A A S L
gm012084_Glyma0    S I N G S D T S V K F S S E P F S N S G D A S S Q A S H L - N K E S R Y S S P I T S P Y - - N V A P M G E Y N - Q A S V
 
AT5G46590.1     E T D S S N I W I S P E F I L D S S K D Y P Q I Q D V A S Q C F Q Q D F D F P I I - - - - - - - - - - - - - - - - - - G
pt012227_POPTR_    E S N P P S H W I S P E L I L D S S K - - - - - - - - - - - - - - - - Y E Y P S S M N T W Q P D T H G E F S P G S S Y S
gm012084_Glyma0    E T N P S N F W I S P D M I L D S S K D Y P P L Q N A V A E C F - P R Y D L P S V M A P W Q S L E H P E T S S S L S Y S
 
AT5G46590.1     N Q N M E F P A S T S L D Q - - - - - - - - - - - N M D E F M Q N G Y W T N Y G Y D Q T G L F G Y S D F S
pt012227_POPTR_    N F T G E I E H A D D L S H I G F M S P Y S E H G N Y M G F G G N D D M H Y Q G Y - - - - - - - - - - - -
gm012084_Glyma0    N F N V E V D F A D S L S Q I G C M S P Y S R Q W N S M D F Y G N G N V P Y D G Y D Q T N S I S Y P E L F
 
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