fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032744 not found in 371aa AT4G17980.1 1st_not 0.498366013 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G46590.1     MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNR
pt032744_POPTR_ MGGASLPPGFRFHPTDEELVGYYLQRKAQGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.:.**************: ***:**.:***************.*******:*****:*

AT5G46590.1     DMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFYKGRAP
pt032744_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATKSGYWKATGKDRKVVCK-SAVTGYRKTLVFYRGRAP
                ****:***.**:***** ****.**:***********:..: *:: *********:****

AT5G46590.1     LGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKI---RKIPSEQTIG
pt032744_POPTR_ LGDRTDWVMHEYRLC-DDISQGSPNLKGAFALCHVVKKNE--QGLKISDSQGEPKAKQVG
                ****::*:******* ** **** ******.**:*. ***   . **   :  *. : :*

AT5G46590.1     SGES-------------------------------SGLSSRVTSPSRDETMPFHSFANPV
pt032744_POPTR_ SSSSNVDFTSAVISNEPSNISFDMSSQASYLYNNESRYSSPITSPY--QVAPMSDFEPAA
                *..*                               *  ** :***   :. *: .*  ..

AT5G46590.1     STETDSSNIWISPEFILDSSKDYPQIQDVASQCFQQDFDFPIIGN-----QNMEF-PAST
pt032744_POPTR_ SMESYPSSHWISPDLILDSSKDYSQVHETAAQYLPQ-YEYPISMNTWQPDRHREFSPGSS
                * *: .*. ****::********.*:::.*:* : * :::**  *     :: ** *.*:

AT5G46590.1     SLD-----QNMDEFMQNGYWTNY-GYDQTGLFG------YSDFS----------------
pt032744_POPTR_ HSNFTGEIEPPDDLSHIGFMSPYSGHGNYLGFGGNDDMHYQGFEPRNQAPICKQASGDGS
                  :     :  *:: : *: : * *:.:   **      *..*.                

AT5G46590.1     ------------------
pt032744_POPTR_ LGEYGGLWSQEDNMVIVI
BoxShade v3.31 C (beta, 970507) Output
AT5G46590.1     M G S S C L P P G F R F H P T D E E L I E Y Y L K R K V E G L E I E L E V I P V I D L Y S F D P W E L P D K S F L P N R
pt032744_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L Q R K A Q G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT5G46590.1     D M E W Y F F C S R D K K Y P N G F R T N R G T K A G Y W K A T G K D R K I T S R S S S I I G Y R K T L V F Y K G R A P
pt032744_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T K S G Y W K A T G K D R K V V C K - S A V T G Y R K T L V F Y R G R A P
 
AT5G46590.1     L G D R S N W I M H E Y R L C D D D T S Q G S Q N L K G A F V L C R V A M K N E I K T N T K I - - - R K I P S E Q T I G
pt032744_POPTR_    L G D R T D W V M H E Y R L C - D D I S Q G S P N L K G A F A L C H V V K K N E - - Q G L K I S D S Q G E P K A K Q V G
 
AT5G46590.1     S G E S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S G L S S R V T S P S R D E T M P F H S F A N P V
pt032744_POPTR_    S S S S N V D F T S A V I S N E P S N I S F D M S S Q A S Y L Y N N E S R Y S S P I T S P Y - - Q V A P M S D F E P A A
 
AT5G46590.1     S T E T D S S N I W I S P E F I L D S S K D Y P Q I Q D V A S Q C F Q Q D F D F P I I G N - - - - - Q N M E F - P A S T
pt032744_POPTR_    S M E S Y P S S H W I S P D L I L D S S K D Y S Q V H E T A A Q Y L P Q - Y E Y P I S M N T W Q P D R H R E F S P G S S
 
AT5G46590.1     S L D - - - - - Q N M D E F M Q N G Y W T N Y - G Y D Q T G L F G - - - - - - Y S D F S - - - - - - - - - - - - - - - -
pt032744_POPTR_    H S N F T G E I E P P D D L S H I G F M S P Y S G H G N Y L G F G G N D D M H Y Q G F E P R N Q A P I C K Q A S G D G S
 
AT5G46590.1     - - - - - - - - - - - - - - - - - -
pt032744_POPTR_    L G E Y G G L W S Q E D N M V I V I
 
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