fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012227 not found in 321aa AT4G17980.1 not_not 0.470588235 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G46590.1     MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNR
pt012227_POPTR_ MGGASLPPGFRFHPTDEELVGYYLHRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.:.**************: ***:*******************.*******:*****:*

AT5G46590.1     DMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFYKGRAP
pt012227_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATQAGYWKATGKDRKVVCQ-SAVTGYRKTLVFYRGRAP
                ****:***.**:***** ****.*:************:..: *:: *********:****

AT5G46590.1     LGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNE--IKTNTKIRKIPSEQTIGS
pt012227_POPTR_ LGDRTDWVMHEYRLC-DDLSQGSPNFKGAFALCRVVKKNEQGLKMSDP-QGEPKAKKVGS
                ****::*:******* ** **** *:****.****. ***  :* .   :  *. :.:**

AT5G46590.1     GESS-----------------GLSSR--------------VTSPSRDETMPFHSFANP-V
pt012227_POPTR_ SSSNVDFTSNVVSNEPSNISFGMSSQASYLYNNGNQYSTPIASPYQVTTV---SELEPAA
                ..*.                 *:**:              ::** :  *:   *  :* .

AT5G46590.1     STETDSSNIWISPEFILDSSK-DYPQIQDVASQCFQQDFDFPIIGNQNMEFPASTSLD--
pt012227_POPTR_ SLESNPPSHWISPELILDSSKYEYPS----SMNTWQPD--------THGEFSPGSSYSNF
                * *::... *****:****** :**.    : : :* *         : **...:* .  

AT5G46590.1     ----QNMDEFMQNGYWTNY----------GYDQTGLFGYSDFS
pt012227_POPTR_ TGEIEHADDLSHIGFMSPYSEHGNYMGFGGNDDMHYQGY----
                    :: *:: : *: : *          * *:    **
BoxShade v3.31 C (beta, 970507) Output
AT5G46590.1     M G S S C L P P G F R F H P T D E E L I E Y Y L K R K V E G L E I E L E V I P V I D L Y S F D P W E L P D K S F L P N R
pt012227_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L H R K V E G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT5G46590.1     D M E W Y F F C S R D K K Y P N G F R T N R G T K A G Y W K A T G K D R K I T S R S S S I I G Y R K T L V F Y K G R A P
pt012227_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T Q A G Y W K A T G K D R K V V C Q - S A V T G Y R K T L V F Y R G R A P
 
AT5G46590.1     L G D R S N W I M H E Y R L C D D D T S Q G S Q N L K G A F V L C R V A M K N E - - I K T N T K I R K I P S E Q T I G S
pt012227_POPTR_    L G D R T D W V M H E Y R L C - D D L S Q G S P N F K G A F A L C R V V K K N E Q G L K M S D P - Q G E P K A K K V G S
 
AT5G46590.1     G E S S - - - - - - - - - - - - - - - - - G L S S R - - - - - - - - - - - - - - V T S P S R D E T M P F H S F A N P - V
pt012227_POPTR_    S S S N V D F T S N V V S N E P S N I S F G M S S Q A S Y L Y N N G N Q Y S T P I A S P Y Q V T T V - - - S E L E P A A
 
AT5G46590.1     S T E T D S S N I W I S P E F I L D S S K - D Y P Q I Q D V A S Q C F Q Q D F D F P I I G N Q N M E F P A S T S L D - -
pt012227_POPTR_    S L E S N P P S H W I S P E L I L D S S K Y E Y P S - - - - S M N T W Q P D - - - - - - - - T H G E F S P G S S Y S N F
 
AT5G46590.1     - - - - Q N M D E F M Q N G Y W T N Y - - - - - - - - - - G Y D Q T G L F G Y S D F S
pt012227_POPTR_    T G E I E H A D D L S H I G F M S P Y S E H G N Y M G F G G N D D M H Y Q G Y - - - -
 
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