fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032744 not found in 371aa AT4G17980.1 1st_not 0.498366013 II
Pt012227 not found in 321aa AT4G17980.1 not_not 0.470588235 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G46590.1     MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNR
pt012227_POPTR_ MGGASLPPGFRFHPTDEELVGYYLHRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
pt032744_POPTR_ MGGASLPPGFRFHPTDEELVGYYLQRKAQGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.:.**************: ***:**.:***************.*******:*****:*

AT5G46590.1     DMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFYKGRAP
pt012227_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATQAGYWKATGKDRKVVCQ-SAVTGYRKTLVFYRGRAP
pt032744_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATKSGYWKATGKDRKVVCK-SAVTGYRKTLVFYRGRAP
                ****:***.**:***** ****.*::***********:..: *:: *********:****

AT5G46590.1     LGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNE-------IKTNTKIRKIPSE
pt012227_POPTR_ LGDRTDWVMHEYRLC-DDLSQGSPNFKGAFALCRVVKKNEQGLKMSDPQGEPKAKKVGSS
pt032744_POPTR_ LGDRTDWVMHEYRLC-DDISQGSPNLKGAFALCHVVKKNEQGLKISDSQGEPKAKQVGSS
                ****::*:******* ** **** *:****.**:*. ***        : :.* ::: *.

AT5G46590.1     QT-------IGSGESSGLS--------------SRVTSP--SRDETMPFHSFANPVSTET
pt012227_POPTR_ SSNVDFTSNVVSNEPSNISFGMSSQASYLYNNGNQYSTPIASPYQVTTVSELEPAASLES
pt032744_POPTR_ SSNVDFTSAVISNEPSNISFDMSSQASYLYNNESRYSSPITSPYQVAPMSDFEPAASMES
                .:       : *.*.*.:*              .: ::*  *  :. .. .:  ..* *:

AT5G46590.1     DSSNIWISPEFILDSSKDYPQIQDVASQCFQQDFDFPIIGN-----QNMEFPASTSLD--
pt012227_POPTR_ NPPSHWISPELILDSSK----------------YEYPSSMNTWQPDTHGEFSPGSSYSNF
pt032744_POPTR_ YPSSHWISPDLILDSSKDYSQVHETAAQ-YLPQYEYPISMNTWQPDRHREFSPGSSHSNF
                 ... ****::******                :::*   *      : **...:* .  

AT5G46590.1     ----QNMDEFMQNGYWTNY----------GYDQTGLFGY-------------SDFS----
pt012227_POPTR_ TGEIEHADDLSHIGFMSPYSEHGNYMGFGGNDDMHYQGY---------------------
pt032744_POPTR_ TGEIEPPDDLSHIGFMSPYSGHGNYLGFGGNDDMHYQGFEPRNQAPICKQASGDGSLGEY
                    :  *:: : *: : *          * *:    *:                     

AT5G46590.1     --------------
pt012227_POPTR_ --------------
pt032744_POPTR_ GGLWSQEDNMVIVI
BoxShade v3.31 C (beta, 970507) Output
AT5G46590.1     M G S S C L P P G F R F H P T D E E L I E Y Y L K R K V E G L E I E L E V I P V I D L Y S F D P W E L P D K S F L P N R
pt012227_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L H R K V E G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
pt032744_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L Q R K A Q G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT5G46590.1     D M E W Y F F C S R D K K Y P N G F R T N R G T K A G Y W K A T G K D R K I T S R S S S I I G Y R K T L V F Y K G R A P
pt012227_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T Q A G Y W K A T G K D R K V V C Q - S A V T G Y R K T L V F Y R G R A P
pt032744_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T K S G Y W K A T G K D R K V V C K - S A V T G Y R K T L V F Y R G R A P
 
AT5G46590.1     L G D R S N W I M H E Y R L C D D D T S Q G S Q N L K G A F V L C R V A M K N E - - - - - - - I K T N T K I R K I P S E
pt012227_POPTR_    L G D R T D W V M H E Y R L C - D D L S Q G S P N F K G A F A L C R V V K K N E Q G L K M S D P Q G E P K A K K V G S S
pt032744_POPTR_    L G D R T D W V M H E Y R L C - D D I S Q G S P N L K G A F A L C H V V K K N E Q G L K I S D S Q G E P K A K Q V G S S
 
AT5G46590.1     Q T - - - - - - - I G S G E S S G L S - - - - - - - - - - - - - - S R V T S P - - S R D E T M P F H S F A N P V S T E T
pt012227_POPTR_    S S N V D F T S N V V S N E P S N I S F G M S S Q A S Y L Y N N G N Q Y S T P I A S P Y Q V T T V S E L E P A A S L E S
pt032744_POPTR_    S S N V D F T S A V I S N E P S N I S F D M S S Q A S Y L Y N N E S R Y S S P I T S P Y Q V A P M S D F E P A A S M E S
 
AT5G46590.1     D S S N I W I S P E F I L D S S K D Y P Q I Q D V A S Q C F Q Q D F D F P I I G N - - - - - Q N M E F P A S T S L D - -
pt012227_POPTR_    N P P S H W I S P E L I L D S S K - - - - - - - - - - - - - - - - Y E Y P S S M N T W Q P D T H G E F S P G S S Y S N F
pt032744_POPTR_    Y P S S H W I S P D L I L D S S K D Y S Q V H E T A A Q - Y L P Q Y E Y P I S M N T W Q P D R H R E F S P G S S H S N F
 
AT5G46590.1     - - - - Q N M D E F M Q N G Y W T N Y - - - - - - - - - - G Y D Q T G L F G Y - - - - - - - - - - - - - S D F S - - - -
pt012227_POPTR_    T G E I E H A D D L S H I G F M S P Y S E H G N Y M G F G G N D D M H Y Q G Y - - - - - - - - - - - - - - - - - - - - -
pt032744_POPTR_    T G E I E P P D D L S H I G F M S P Y S G H G N Y L G F G G N D D M H Y Q G F E P R N Q A P I C K Q A S G D G S L G E Y
 
AT5G46590.1     - - - - - - - - - - - - - -
pt012227_POPTR_    - - - - - - - - - - - - - -
pt032744_POPTR_    G G L W S Q E D N M V I V I
 
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