fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047190 not found in 302aa AT4G17980.1 1st_not 0.5 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G46590.1     MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNR
gm047190_Glyma1 MGGATLPPGFRFHPTDEELVGYYLKRKVEGIEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.: **************: *********:*************.*******:*****:*

AT5G46590.1     DMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSS-SIIGYRKTLVFYKGRA
gm047190_Glyma1 DLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSNPSTVGYRKTLVFYLGRA
                *:**:***.**:***** ****.**************:..:*. * :********* ***

AT5G46590.1     PLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIRKIPSEQTIGSG
gm047190_Glyma1 PLGDRTDWVMHEYRLC-DDLGQATPCFQGGFALCRVIKKNE-------KAMSHSATL---
                *****::*:******* ** .*.:  ::*.*.****  ***       : :. . *:   

AT5G46590.1     ESSGLSSRVTSPSRDETMPFHSFANPVSTE-TDSSNIWISPEFILDSSKDYPQIQDVASQ
gm047190_Glyma1 --SRYSSPITSPY--NVAPMGEF-NQASVETTNPSNFWISPDMILDSSKDYSQLQNAMAE
                  *  ** :***   :. *: .* * .*.* *:.**:****::********.*:*:. ::

AT5G46590.1     CFQQDFDFPIIGN--QNMEFPASTS----------------LDQ-------NMDEFMQNG
gm047190_Glyma1 CFPR-YDLPSVMAPWQSLEHPETSSSLSYSNFNGEVEFADNLSQIGCTRQWNSMDLYGNG
                ** : :*:* :    *.:*.* ::*                *.*       *  ::  **

AT5G46590.1     YWTNYGYDQTGLFGYSD-FS
gm047190_Glyma1 DVPYDGYDQVNSISYPEPF-
                  .  ****.. :.*.: *
BoxShade v3.31 C (beta, 970507) Output
AT5G46590.1     M G S S C L P P G F R F H P T D E E L I E Y Y L K R K V E G L E I E L E V I P V I D L Y S F D P W E L P D K S F L P N R
gm047190_Glyma1    M G G A T L P P G F R F H P T D E E L V G Y Y L K R K V E G I E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT5G46590.1     D M E W Y F F C S R D K K Y P N G F R T N R G T K A G Y W K A T G K D R K I T S R S S - S I I G Y R K T L V F Y K G R A
gm047190_Glyma1    D L E W F F F C P R D R K Y P N G S R T N R A T K A G Y W K A T G K D R K V V C Q S N P S T V G Y R K T L V F Y L G R A
 
AT5G46590.1     P L G D R S N W I M H E Y R L C D D D T S Q G S Q N L K G A F V L C R V A M K N E I K T N T K I R K I P S E Q T I G S G
gm047190_Glyma1    P L G D R T D W V M H E Y R L C - D D L G Q A T P C F Q G G F A L C R V I K K N E - - - - - - - K A M S H S A T L - - -
 
AT5G46590.1     E S S G L S S R V T S P S R D E T M P F H S F A N P V S T E - T D S S N I W I S P E F I L D S S K D Y P Q I Q D V A S Q
gm047190_Glyma1    - - S R Y S S P I T S P Y - - N V A P M G E F - N Q A S V E T T N P S N F W I S P D M I L D S S K D Y S Q L Q N A M A E
 
AT5G46590.1     C F Q Q D F D F P I I G N - - Q N M E F P A S T S - - - - - - - - - - - - - - - - L D Q - - - - - - - N M D E F M Q N G
gm047190_Glyma1    C F P R - Y D L P S V M A P W Q S L E H P E T S S S L S Y S N F N G E V E F A D N L S Q I G C T R Q W N S M D L Y G N G
 
AT5G46590.1     Y W T N Y G Y D Q T G L F G Y S D - F S
gm047190_Glyma1    D V P Y D G Y D Q V N S I S Y P E P F -
 
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