fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012084 not found in 330aa AT4G17980.1 not_not 0.475490196 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G46590.1     MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNR
gm012084_Glyma0 MGGATLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKR
                **.: **************: *********************:*.*******:*****:*

AT5G46590.1     DMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFYKGRAP
gm012084_Glyma0 DLEWFFFCPRDRKYPNGSRTNRATKAGYWKAT--------------GYRKTLVFYLGRAP
                *:**:***.**:***** ****.*********              ********* ****

AT5G46590.1     LGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKN------------------EIK
gm012084_Glyma0 MGDRTDWVMHEYRLC-DDLGQATPCFQGGFALCRVIKKNVKASVSQGEHKGKRAGSSSIN
                :***::*:******* ** .*.:  ::*.*.****  **                  .*:

AT5G46590.1     TNTKIRKIPSEQTIGSGESSGLSSRVTSPSRDE---TMPFHSFA----NPVSTETDSSNI
gm012084_Glyma0 GSDTSVKFSSEPFSNSGDASSQASHLNKESRYSSPITSPYNVAPMGEYNQASVETNPSNF
                 . .  *:.**   .**::*. :*::.. ** .   * *::  .    * .*.**:.**:

AT5G46590.1     WISPEFILDSSKDYPQIQDVASQCFQQDFDFPII------------------GNQNMEFP
gm012084_Glyma0 WISPDMILDSSKDYPPLQNAVAECFPR-YDLPSVMAPWQSLEHPETSSSLSYSNFNVEVD
                ****::********* :*:..::** : :*:* :                  .* *:*. 

AT5G46590.1     ASTSLDQ-----------NMDEFMQNGYWTNYGYDQTGLFGYSDFS
gm012084_Glyma0 FADSLSQIGCMSPYSRQWNSMDFYGNGNVPYDGYDQTNSISYPELF
                 : **.*           *  :*  **  .  *****. :.*.::
BoxShade v3.31 C (beta, 970507) Output
AT5G46590.1     M G S S C L P P G F R F H P T D E E L I E Y Y L K R K V E G L E I E L E V I P V I D L Y S F D P W E L P D K S F L P N R
gm012084_Glyma0    M G G A T L P P G F R F H P T D E E L V G Y Y L K R K V E G L E I E L E V I P V I D F Y K F D P W E L P E K S F L P K R
 
AT5G46590.1     D M E W Y F F C S R D K K Y P N G F R T N R G T K A G Y W K A T G K D R K I T S R S S S I I G Y R K T L V F Y K G R A P
gm012084_Glyma0    D L E W F F F C P R D R K Y P N G S R T N R A T K A G Y W K A T - - - - - - - - - - - - - - G Y R K T L V F Y L G R A P
 
AT5G46590.1     L G D R S N W I M H E Y R L C D D D T S Q G S Q N L K G A F V L C R V A M K N - - - - - - - - - - - - - - - - - - E I K
gm012084_Glyma0    M G D R T D W V M H E Y R L C - D D L G Q A T P C F Q G G F A L C R V I K K N V K A S V S Q G E H K G K R A G S S S I N
 
AT5G46590.1     T N T K I R K I P S E Q T I G S G E S S G L S S R V T S P S R D E - - - T M P F H S F A - - - - N P V S T E T D S S N I
gm012084_Glyma0    G S D T S V K F S S E P F S N S G D A S S Q A S H L N K E S R Y S S P I T S P Y N V A P M G E Y N Q A S V E T N P S N F
 
AT5G46590.1     W I S P E F I L D S S K D Y P Q I Q D V A S Q C F Q Q D F D F P I I - - - - - - - - - - - - - - - - - - G N Q N M E F P
gm012084_Glyma0    W I S P D M I L D S S K D Y P P L Q N A V A E C F P R - Y D L P S V M A P W Q S L E H P E T S S S L S Y S N F N V E V D
 
AT5G46590.1     A S T S L D Q - - - - - - - - - - - N M D E F M Q N G Y W T N Y G Y D Q T G L F G Y S D F S
gm012084_Glyma0    F A D S L S Q I G C M S P Y S R Q W N S M D F Y G N G N V P Y D G Y D Q T N S I S Y P E L F
 
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