fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010953 not found in 375aa AT4G17950.1 1st_not 0.439344262 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G46640.1     MDSRDIP---PSHNQLQPPPGMLMSHYRNPNAAASPLMV-------PTSTSQPIQHPRL-
pt010953_POPTR_ MDSREPPQPSPQPQQLQSP------HAPPPQLQSQPSMILVPTSSYPSTTSHLINNPNIS
                ****: *   *. :***.*      *   *:  :.* *:       *::**: *::*.: 

AT5G46640.1     ----------PF----GNQQQSQTFHQQQQQQMDQKTLESLGFGDGSP--SSQPMRFGID
pt010953_POPTR_ PQNAALGGGFPFNTMSGNRLQSK----------------PEGAFDGSSPTSSSGMRFSIE
                          **    **: **:                . *  ***.  **. ***.*:

AT5G46640.1     DQNQQLQVKKKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDP-
pt010953_POPTR_ ------PAKKKRGRPRKYTPDGNIALGLSPT-PVPSGIS-----AGHADSGGGGVTHDAA
                       .**************.*****:** *: *. *     .* .****.* : *. 

AT5G46640.1     ---PVKRNRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTIC
pt010953_POPTR_ SEHPSKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVC
                   * *:********.*********..********* *::*******:****:**.**:*

AT5G46640.1     ILSASGAVSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGP
pt010953_POPTR_ ILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRSGGLSVSLAGS
                ****.**:..* ***.: *.* **********:****.*  * *** .***.***:***.

AT5G46640.1     DGGIVGGSVVGNLVAATQVQVIVGSFVAEAKKPKQSSVNIARGQNPEPASAPANMLNFGS
pt010953_POPTR_ DGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASKSGPSSTP-----PPQMLNFSA
                ** ::**.*.* *.**: ********:*:.**.:.*: : . ...*     *.:****.:

AT5G46640.1     -------VSQGPSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWS
pt010953_POPTR_ PLTTASPPSQGGSSDSSDEN-GGSPV---NRNPGIYGNPNQS------IHNMQMYQ-LWA
                        *** **:**:** .***.   :.* ****  :*.       *:***** **:

AT5G46640.1     NHGQ-
pt010953_POPTR_ DQNPR
                ::.
BoxShade v3.31 C (beta, 970507) Output
AT5G46640.1     M D S R D I P - - - P S H N Q L Q P P P G M L M S H Y R N P N A A A S P L M V - - - - - - - P T S T S Q P I Q H P R L -
pt010953_POPTR_    M D S R E P P Q P S P Q P Q Q L Q S P - - - - - - H A P P P Q L Q S Q P S M I L V P T S S Y P S T T S H L I N N P N I S
 
AT5G46640.1     - - - - - - - - - - P F - - - - G N Q Q Q S Q T F H Q Q Q Q Q Q M D Q K T L E S L G F G D G S P - - S S Q P M R F G I D
pt010953_POPTR_    P Q N A A L G G G F P F N T M S G N R L Q S K - - - - - - - - - - - - - - - - P E G A F D G S S P T S S S G M R F S I E
 
AT5G46640.1     D Q N Q Q L Q V K K K R G R P R K Y T P D G S I A L G L A P T S P L L S A A S N S Y G E G G V G D S G G N G N S V D P -
pt010953_POPTR_    - - - - - - P A K K K R G R P R K Y T P D G N I A L G L S P T - P V P S G I S - - - - - A G H A D S G G G G V T H D A A
 
AT5G46640.1     - - - P V K R N R G R P P G S S K K Q L D A L G G T S G V G F T P H V I E V N T G E D I A S K V M A F S D Q G S R T I C
pt010953_POPTR_    S E H P S K K N R G R P P G S G K K Q L D A L G G V G G V G F T P H V I T V K A G E D I A S K I M A F S Q Q G P R T V C
 
AT5G46640.1     I L S A S G A V S R V M L R Q A S H S S G I V T Y E G R F E I I T L S G S V L N Y E V N G S T N R S G N L S V A L A G P
pt010953_POPTR_    I L S A N G A I C N V T L R Q P A M S G G S V T Y E G R F E I I S L S G S F L L S E S N G S R S R S G G L S V S L A G S
 
AT5G46640.1     D G G I V G G S V V G N L V A A T Q V Q V I V G S F V A E A K K P K Q S S V N I A R G Q N P E P A S A P A N M L N F G S
pt010953_POPTR_    D G R V L G G G V A G M L T A A S P V Q V I V G S F I A D G K K S N S S A S K S G P S S T P - - - - - P P Q M L N F S A
 
AT5G46640.1     - - - - - - - V S Q G P S S E S S E E N E S G S P A M H R D N N N G I Y G A Q Q Q Q Q Q Q P L H P H Q M Q M Y Q H L W S
pt010953_POPTR_    P L T T A S P P S Q G G S S D S S D E N - G G S P V - - - N R N P G I Y G N P N Q S - - - - - - I H N M Q M Y Q - L W A
 
AT5G46640.1     N H G Q -
pt010953_POPTR_    D Q N P R
 
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