fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010953 not found in 375aa AT4G17950.1 1st_not 0.439344262 II
Pt031108 not found in 377aa AT4G17950.1 not_not 0.431147540 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G46640.1     MDSRDIP---PSHNQLQ----PPPGMLMSHYRNPNAAASPL-MVPTSTS-QPIQHPRL--
pt031108_POPTR_ MDSREPPPPQPPPQQLQPPHAPPPP-----QSQSNMIPGPI-SYPATASPHLINNRSISP
pt010953_POPTR_ MDSREPPQPSPQPQQLQSPHAPPPQL----QSQPSMILVPTSSYPSTTS-HLINNPNISP
                ****: *   *  :***    ***        :..    *    *:::* : *::  :  

AT5G46640.1     ---------PFGNQQQSQTFHQQQQQQMDQKTLESLGFGDGSPSSQPMRFGIDDQNQQLQ
pt031108_POPTR_ QNAAIGGGFPF-NQMSAQRLQSKPEGAFD---------GSSPTSSSGMRFSIE------P
pt010953_POPTR_ QNAALGGGFPF-NTMSGNRLQSKPEGAFD---------GSSPTSSSGMRFSIE------P
                         ** *  ..: ::.: :  :*         *....**. ***.*:       

AT5G46640.1     VKKKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGN-GNSVDP------P
pt031108_POPTR_ AKKKRGRPRKYTPDGNIALGLSPT-PIHSGMS-----AGQADSSGGAGSGVMPDVASEHP
pt010953_POPTR_ AKKKRGRPRKYTPDGNIALGLSPT-PVPSGIS-----AGHADSGGG---GVTHDAASEHP
                .**************.*****:** *: *. *     .* .**.*.   .*        *

AT5G46640.1     VKRNRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSA
pt031108_POPTR_ SKKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSA
pt010953_POPTR_ SKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSA
                 *::*******.*********..********* *::*******:****:**.**:*****

AT5G46640.1     SGAVSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGI
pt031108_POPTR_ NGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRTGGLSVSLAGSDGRV
pt010953_POPTR_ NGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRSGGLSVSLAGSDGRV
                .**:..* ***.: *.* **********:****.*  * *** .*:*.***:***.** :

AT5G46640.1     VGGSVVGNLVAATQVQVIVGSFVAEAKKPKQSSVNIARGQNPEPASAPANMLNFGS----
pt031108_POPTR_ LGGGVAGMLTAASAVQVILGSFIADGKKSNSKSLKSGPSSTP-----PPQMLNFGAPLTT
pt010953_POPTR_ LGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASKSGPSSTP-----PPQMLNFSAPLTT
                :**.*.* *.**: ****:***:*:.**.:..: : . ...*     *.:****.:    

AT5G46640.1     ---VSQGPSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWSNHGQ
pt031108_POPTR_ ASPPSRGGSSESSDEN-GGSPV---NRTPGIYG----NPSQPI--HNMQMYQ-LWGGQNP
pt010953_POPTR_ ASPPSQGGSSDSSDEN-GGSPV---NRNPGIYG----NPNQSI--HNMQMYQ-LWADQNP
                    *:* **:**:** .***.   :.. ****    : .*.:  *:***** **..:. 

AT5G46640.1     -
pt031108_POPTR_ E
pt010953_POPTR_ R
BoxShade v3.31 C (beta, 970507) Output
AT5G46640.1     M D S R D I P - - - P S H N Q L Q - - - - P P P G M L M S H Y R N P N A A A S P L - M V P T S T S - Q P I Q H P R L - -
pt031108_POPTR_    M D S R E P P P P Q P P P Q Q L Q P P H A P P P P - - - - - Q S Q S N M I P G P I - S Y P A T A S P H L I N N R S I S P
pt010953_POPTR_    M D S R E P P Q P S P Q P Q Q L Q S P H A P P P Q L - - - - Q S Q P S M I L V P T S S Y P S T T S - H L I N N P N I S P
 
AT5G46640.1     - - - - - - - - - P F G N Q Q Q S Q T F H Q Q Q Q Q Q M D Q K T L E S L G F G D G S P S S Q P M R F G I D D Q N Q Q L Q
pt031108_POPTR_    Q N A A I G G G F P F - N Q M S A Q R L Q S K P E G A F D - - - - - - - - - G S S P T S S S G M R F S I E - - - - - - P
pt010953_POPTR_    Q N A A L G G G F P F - N T M S G N R L Q S K P E G A F D - - - - - - - - - G S S P T S S S G M R F S I E - - - - - - P
 
AT5G46640.1     V K K K R G R P R K Y T P D G S I A L G L A P T S P L L S A A S N S Y G E G G V G D S G G N - G N S V D P - - - - - - P
pt031108_POPTR_    A K K K R G R P R K Y T P D G N I A L G L S P T - P I H S G M S - - - - - A G Q A D S S G G A G S G V M P D V A S E H P
pt010953_POPTR_    A K K K R G R P R K Y T P D G N I A L G L S P T - P V P S G I S - - - - - A G H A D S G G G - - - G V T H D A A S E H P
 
AT5G46640.1     V K R N R G R P P G S S K K Q L D A L G G T S G V G F T P H V I E V N T G E D I A S K V M A F S D Q G S R T I C I L S A
pt031108_POPTR_    S K K H R G R P P G S G K K Q L D A L G G T G G V G F T P H V I T V K A G E D I A S K I M A F S Q Q G P R T V C I L S A
pt010953_POPTR_    S K K N R G R P P G S G K K Q L D A L G G V G G V G F T P H V I T V K A G E D I A S K I M A F S Q Q G P R T V C I L S A
 
AT5G46640.1     S G A V S R V M L R Q A S H S S G I V T Y E G R F E I I T L S G S V L N Y E V N G S T N R S G N L S V A L A G P D G G I
pt031108_POPTR_    N G A I C N V T L R Q P A M S G G S V T Y E G R F E I I S L S G S F L L S E S N G S R S R T G G L S V S L A G S D G R V
pt010953_POPTR_    N G A I C N V T L R Q P A M S G G S V T Y E G R F E I I S L S G S F L L S E S N G S R S R S G G L S V S L A G S D G R V
 
AT5G46640.1     V G G S V V G N L V A A T Q V Q V I V G S F V A E A K K P K Q S S V N I A R G Q N P E P A S A P A N M L N F G S - - - -
pt031108_POPTR_    L G G G V A G M L T A A S A V Q V I L G S F I A D G K K S N S K S L K S G P S S T P - - - - - P P Q M L N F G A P L T T
pt010953_POPTR_    L G G G V A G M L T A A S P V Q V I V G S F I A D G K K S N S S A S K S G P S S T P - - - - - P P Q M L N F S A P L T T
 
AT5G46640.1     - - - V S Q G P S S E S S E E N E S G S P A M H R D N N N G I Y G A Q Q Q Q Q Q Q P L H P H Q M Q M Y Q H L W S N H G Q
pt031108_POPTR_    A S P P S R G G S S E S S D E N - G G S P V - - - N R T P G I Y G - - - - N P S Q P I - - H N M Q M Y Q - L W G G Q N P
pt010953_POPTR_    A S P P S Q G G S S D S S D E N - G G S P V - - - N R N P G I Y G - - - - N P N Q S I - - H N M Q M Y Q - L W A D Q N P
 
AT5G46640.1     -
pt031108_POPTR_    E
pt010953_POPTR_    R
 
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