fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G46640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031108 not found in 377aa AT4G17950.1 not_not 0.431147540 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G46640.1     MDSRDIPPSHNQLQPPPGMLMSHYRNPNAAASPLMVPTSTSQP-IQHPRL----------
pt031108_POPTR_ MDSREPPPP----QPPPQQLQPPHAPPPPQSQSNMIPGPISYPATASPHLINNRSISPQN
                ****: **.    ****  * . :  * . :.. *:* . * *    *:*          

AT5G46640.1     -------PFGNQQQSQTFHQQQQQQMDQKTLESLGFGDGSPSSQPMRFGIDDQNQQLQVK
pt031108_POPTR_ AAIGGGFPF-NQMSAQRLQSKPEGAFD---------GSSPTSSSGMRFSIE------PAK
                       ** ** .:* ::.: :  :*         *....**. ***.*:       .*

AT5G46640.1     KKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDP------PVKR
pt031108_POPTR_ KKRGRPRKYTPDGNIALGLSPT-PIHSGMS----AGQADSSGGAGSGVMPDVASEHPSKK
                *************.*****:** *: *. *     * ...*** *..* *      * *:

AT5G46640.1     NRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSASGA
pt031108_POPTR_ HRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSANGA
                :*******.**********.********* *::*******:****:**.**:*****.**

AT5G46640.1     VSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGG
pt031108_POPTR_ ICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRTGGLSVSLAGSDGRVLGG
                :..* ***.: *.* **********:****.*  * *** .*:*.***:***.** ::**

AT5G46640.1     SVVGNLVAATQVQVIVGSFVAEAKKPKQSSVNIARGQNPEPASAPANMLNFGS-------
pt031108_POPTR_ GVAGMLTAASAVQVILGSFIADGKKSNSKSLKSGPSSTP-----PPQMLNFGAPLTTASP
                .*.* *.**: ****:***:*:.**.:..*:: . ...*     *.:*****:       

AT5G46640.1     VSQGPSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWSNHGQ---
pt031108_POPTR_ PSRGGSSESSDEN-GGSPV---NRTPGIYG----NPSQPI--HNMQMYQ-LWG--GQNPE
                 *:* *****:** .***.   :.. ****    : .**:  *:***** **.  **
BoxShade v3.31 C (beta, 970507) Output
AT5G46640.1     M D S R D I P P S H N Q L Q P P P G M L M S H Y R N P N A A A S P L M V P T S T S Q P - I Q H P R L - - - - - - - - - -
pt031108_POPTR_    M D S R E P P P P - - - - Q P P P Q Q L Q P P H A P P P P Q S Q S N M I P G P I S Y P A T A S P H L I N N R S I S P Q N
 
AT5G46640.1     - - - - - - - P F G N Q Q Q S Q T F H Q Q Q Q Q Q M D Q K T L E S L G F G D G S P S S Q P M R F G I D D Q N Q Q L Q V K
pt031108_POPTR_    A A I G G G F P F - N Q M S A Q R L Q S K P E G A F D - - - - - - - - - G S S P T S S S G M R F S I E - - - - - - P A K
 
AT5G46640.1     K K R G R P R K Y T P D G S I A L G L A P T S P L L S A A S N S Y G E G G V G D S G G N G N S V D P - - - - - - P V K R
pt031108_POPTR_    K K R G R P R K Y T P D G N I A L G L S P T - P I H S G M S - - - - A G Q A D S S G G A G S G V M P D V A S E H P S K K
 
AT5G46640.1     N R G R P P G S S K K Q L D A L G G T S G V G F T P H V I E V N T G E D I A S K V M A F S D Q G S R T I C I L S A S G A
pt031108_POPTR_    H R G R P P G S G K K Q L D A L G G T G G V G F T P H V I T V K A G E D I A S K I M A F S Q Q G P R T V C I L S A N G A
 
AT5G46640.1     V S R V M L R Q A S H S S G I V T Y E G R F E I I T L S G S V L N Y E V N G S T N R S G N L S V A L A G P D G G I V G G
pt031108_POPTR_    I C N V T L R Q P A M S G G S V T Y E G R F E I I S L S G S F L L S E S N G S R S R T G G L S V S L A G S D G R V L G G
 
AT5G46640.1     S V V G N L V A A T Q V Q V I V G S F V A E A K K P K Q S S V N I A R G Q N P E P A S A P A N M L N F G S - - - - - - -
pt031108_POPTR_    G V A G M L T A A S A V Q V I L G S F I A D G K K S N S K S L K S G P S S T P - - - - - P P Q M L N F G A P L T T A S P
 
AT5G46640.1     V S Q G P S S E S S E E N E S G S P A M H R D N N N G I Y G A Q Q Q Q Q Q Q P L H P H Q M Q M Y Q H L W S N H G Q - - -
pt031108_POPTR_    P S R G G S S E S S D E N - G G S P V - - - N R T P G I Y G - - - - N P S Q P I - - H N M Q M Y Q - L W G - - G Q N P E
 
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