fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012127 not found in 536aa AT4G17570.1 1st_not 0.475728155 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47140.1     MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYTPLHARAEGDETEIE
pt012127_POPTR_ MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPD--DYE
                ******* ********************************:*.********** *  : *

AT5G47140.1     DHRTQTVMIKGMSLNK--KIPKRKPYQENFTVKRANLEFHTGFKRKALDEEASNRSSSGS
pt012127_POPTR_ DHRVSRLKSVSISKNKEVKLLKRKPNYDN----RVALDYNQGY-RKVVDEDTSNRSSSGS
                ***.. :   .:* **  *: ****  :*    *. *::: *: **.:**::********

AT5G47140.1     VVSNSESC----------AQSNAWDSTFPCKRRTCVGRPKAASSVEKLTKDLYTILQEQQ
pt012127_POPTR_ AISNPESCAQFGSAEASPAQSVVWDSLVPSRKRTCVNRPK-PSSVEKLTKDLYTILHEQQ
                .:**.***          *** .*** .*.::****.*** .**************:***

AT5G47140.1     SSCLSGTSEEDLLFENETPML---LGHGSVLMRDPHSGAREEESEASSLLVES-------
pt012127_POPTR_ SSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIRHPSSIARDEESEASSLSVENKQYLTNE
                ***:**:*******:*****:   :******:*.* * **:******** **.       

AT5G47140.1     -----------SKSSSVHSV--------KFGGKAMKQEQVKR-----SKSQVLGRHSSLL
pt012127_POPTR_ AYSHPVILPVHNENKSVNTTYPITETTKNLTGQGMQQEQLKRDKFPHEKVHILGSHNSPL
                           .:..**::.        :: *:.*:***:**     .* ::** *.* *

AT5G47140.1     CSIDLKDVFNFDEFIENFTEEEQQKLMKLLPQVDSVDRPDSLRSMFESSQFKENLSLFQQ
pt012127_POPTR_ CSIDLNDILNFEEFARHLTNEEQQQLLKYLPPLDTTKLPNSIESMFDSPQFKENINSYQQ
                *****:*::**:** .::*:****:*:* ** :*:.. *:*:.***:*.*****:. :**

AT5G47140.1     LVADGVFETNSSYAKLEDIKTLAKLALSDPNKSHLLESYYMLKRREIEDCVTTTSRVSSL
pt012127_POPTR_ LLSEGVFDLSFSEAKTEDCKTLKRLTLSNFLKSKWVERYHLLKK-----CKNSNGK-SFV
                *:::***: . * ** ** *** :*:**:  **: :* *::**:     * .:..: * :

AT5G47140.1     SPSNNNSLVTI------ERPCESLNQNFSETRGVMRSPKEVMKIRSKHTEENLENSVSSF
pt012127_POPTR_ GKGPNPDVVAMSNIAGAKRSRDSPSQKFSEVK-LMKSPKRIIMKATYENKELIDNDGSCF
                . . * .:*::      :*. :* .*:***.: :*:***.::   : ..:* ::*. *.*

AT5G47140.1     KPVSC------GGPLVFS--YEDNDISDQDLLLDVPSNGSFPQAELLNMI----------
pt012127_POPTR_ SPRSLFALPTDGSSLMLDSLHFVDESSDQDLLLDIPSNGSFAQAELFYPTNSFGQQASTS
                .* *       *..*::.  :  :: ********:******.****:             

AT5G47140.1     -----------
pt012127_POPTR_ SSSIYPHLGRP
BoxShade v3.31 C (beta, 970507) Output
AT5G47140.1     M G K Q G P C Y H C G V T S T P L W R N G P P E K P V L C N A C G S R W R T K G S L V N Y T P L H A R A E G D E T E I E
pt012127_POPTR_    M G K Q G P C C H C G V T S T P L W R N G P P E K P V L C N A C G S R W R T K G T L A N Y T P L H A R A E P D - - D Y E
 
AT5G47140.1     D H R T Q T V M I K G M S L N K - - K I P K R K P Y Q E N F T V K R A N L E F H T G F K R K A L D E E A S N R S S S G S
pt012127_POPTR_    D H R V S R L K S V S I S K N K E V K L L K R K P N Y D N - - - - R V A L D Y N Q G Y - R K V V D E D T S N R S S S G S
 
AT5G47140.1     V V S N S E S C - - - - - - - - - - A Q S N A W D S T F P C K R R T C V G R P K A A S S V E K L T K D L Y T I L Q E Q Q
pt012127_POPTR_    A I S N P E S C A Q F G S A E A S P A Q S V V W D S L V P S R K R T C V N R P K - P S S V E K L T K D L Y T I L H E Q Q
 
AT5G47140.1     S S C L S G T S E E D L L F E N E T P M L - - - L G H G S V L M R D P H S G A R E E E S E A S S L L V E S - - - - - - -
pt012127_POPTR_    S S C F S G S S E E D L L F D N E T P M V S V E I G H G S V L I R H P S S I A R D E E S E A S S L S V E N K Q Y L T N E
 
AT5G47140.1     - - - - - - - - - - - S K S S S V H S V - - - - - - - - K F G G K A M K Q E Q V K R - - - - - S K S Q V L G R H S S L L
pt012127_POPTR_    A Y S H P V I L P V H N E N K S V N T T Y P I T E T T K N L T G Q G M Q Q E Q L K R D K F P H E K V H I L G S H N S P L
 
AT5G47140.1     C S I D L K D V F N F D E F I E N F T E E E Q Q K L M K L L P Q V D S V D R P D S L R S M F E S S Q F K E N L S L F Q Q
pt012127_POPTR_    C S I D L N D I L N F E E F A R H L T N E E Q Q Q L L K Y L P P L D T T K L P N S I E S M F D S P Q F K E N I N S Y Q Q
 
AT5G47140.1     L V A D G V F E T N S S Y A K L E D I K T L A K L A L S D P N K S H L L E S Y Y M L K R R E I E D C V T T T S R V S S L
pt012127_POPTR_    L L S E G V F D L S F S E A K T E D C K T L K R L T L S N F L K S K W V E R Y H L L K K - - - - - C K N S N G K - S F V
 
AT5G47140.1     S P S N N N S L V T I - - - - - - E R P C E S L N Q N F S E T R G V M R S P K E V M K I R S K H T E E N L E N S V S S F
pt012127_POPTR_    G K G P N P D V V A M S N I A G A K R S R D S P S Q K F S E V K - L M K S P K R I I M K A T Y E N K E L I D N D G S C F
 
AT5G47140.1     K P V S C - - - - - - G G P L V F S - - Y E D N D I S D Q D L L L D V P S N G S F P Q A E L L N M I - - - - - - - - - -
pt012127_POPTR_    S P R S L F A L P T D G S S L M L D S L H F V D E S S D Q D L L L D I P S N G S F A Q A E L F Y P T N S F G Q Q A S T S
 
AT5G47140.1     - - - - - - - - - - -
pt012127_POPTR_    S S S I Y P H L G R P
 
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