fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047103 not found in 251aa AT4G17500.1 1st_not 0.487623762 II
Pt009912 not found in 280aa AT4G17500.1 1st_not 0.477722772 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47220.1     MYGQCNI-ESDYALLESITRHLLGGGGENEL-----------------------------
gm047103_Glyma1 MYGRSDSYESDLALLDSIRRHLL---GESELIFGAPNFGSG-------------------
pt009912_POPTR_ MYGQSLLDQPDYAFLDPVRLHLQ---GET--VSTAPTTTCSYTPAITTTTAAPAANYTPP
                ***:.   :.* *:*:.:  **    **.                               

AT5G47220.1     ----RLNE-STPSSCFTESWGGLPLKENDSEDMLVYGLLKDAFHFDTSS-----SDLSCL
gm047103_Glyma1 ----RSSSFSSLDSCLSDDWGELPFKEDDSEDMVLYGVLRDAVNVGWVPSLDAGSPESVS
pt009912_POPTR_ LVYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYAVLRDAVTVGWVPSLK--TDQLVQ
                    * .. *:  .*:::.** **:* :*****.:*.:*:**. ..  .     :     

AT5G47220.1     FDFPAVKVEPTENFTAMEEKPKKAIPVTETAV---KAKHYRGVRQRPWGKFAAEIRDPAK
gm047103_Glyma1 SGFPAVKLEPDVMPALINPCPPPAPAVEEKKVVPPKGKHYRGVRQRPWGKFAAEIRDPAK
pt009912_POPTR_ PNFPLVKLEPTENLA-VSP-PSTAVPVAEPAVLPSKGKHYRGVRQRPWGKFAAEIRDPAK
                 .** **:**    : :.  *  * .* *  *   *.***********************

AT5G47220.1     NGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSS
gm047103_Glyma1 NGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSSPE-
pt009912_POPTR_ NGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKR-SSPEP
                ********************* **:************************:**** **.. 

AT5G47220.1     SSSSSTSSSENGKLKRRR-KAENL--TSEVV---------QVKCEVGDETRVDELLVS
gm047103_Glyma1 -------SMAAAAPKRKKVMVVGT-------------VQEQVGSQVVECTRGEQLLVS
pt009912_POPTR_ S-----SSVDSGSPKRRK-KVGGTAGAATVVAKAGLEIGNGVGCQV--GTHGEQMLVI
                       *   .  **::  . .                  * .:*   *: :::**
BoxShade v3.31 C (beta, 970507) Output
AT5G47220.1     M Y G Q C N I - E S D Y A L L E S I T R H L L G G G G E N E L - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047103_Glyma1    M Y G R S D S Y E S D L A L L D S I R R H L L - - - G E S E L I F G A P N F G S G - - - - - - - - - - - - - - - - - - -
pt009912_POPTR_    M Y G Q S L L D Q P D Y A F L D P V R L H L Q - - - G E T - - V S T A P T T T C S Y T P A I T T T T A A P A A N Y T P P
 
AT5G47220.1     - - - - R L N E - S T P S S C F T E S W G G L P L K E N D S E D M L V Y G L L K D A F H F D T S S - - - - - S D L S C L
gm047103_Glyma1    - - - - R S S S F S S L D S C L S D D W G E L P F K E D D S E D M V L Y G V L R D A V N V G W V P S L D A G S P E S V S
pt009912_POPTR_    L V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y A V L R D A V T V G W V P S L K - - T D Q L V Q
 
AT5G47220.1     F D F P A V K V E P T E N F T A M E E K P K K A I P V T E T A V - - - K A K H Y R G V R Q R P W G K F A A E I R D P A K
gm047103_Glyma1    S G F P A V K L E P D V M P A L I N P C P P P A P A V E E K K V V P P K G K H Y R G V R Q R P W G K F A A E I R D P A K
pt009912_POPTR_    P N F P L V K L E P T E N L A - V S P - P S T A V P V A E P A V L P S K G K H Y R G V R Q R P W G K F A A E I R D P A K
 
AT5G47220.1     N G A R V W L G T F E T A E D A A L A Y D I A A F R M R G S R A L L N F P L R V N S G E P D P V R I T S K R S S S S S S
gm047103_Glyma1    N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P D P V R V T S K R S S S P E -
pt009912_POPTR_    N G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P D P V R V T S K R - S S P E P
 
AT5G47220.1     S S S S S T S S S E N G K L K R R R - K A E N L - - T S E V V - - - - - - - - - Q V K C E V G D E T R V D E L L V S
gm047103_Glyma1    - - - - - - - S M A A A A P K R K K V M V V G T - - - - - - - - - - - - - V Q E Q V G S Q V V E C T R G E Q L L V S
pt009912_POPTR_    S - - - - - S S V D S G S P K R R K - K V G G T A G A A T V V A K A G L E I G N G V G C Q V - - G T H G E Q M L V I
 
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