fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032748 not found in 283aa AT4G17500.1 not_not 0.470297029 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47220.1     MYGQCNI-ESDYALLESITRHLLGGGGE--------NELRLNE-------STPSS-----
pt032748_POPTR_ MYGENFLDQSDYAFLESVRMHLLGEPTSPTTASSCFNPASTNSAMSAAAATTPATCTPVP
                ***:  : :****:***:  ****   .        *    *.       :**::     

AT5G47220.1     -------------CFTESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLF---DF
pt032748_POPTR_ VYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYGVLSDAVTVGWVPSLKTDQFIEPNL
                             *:**.**.**** :*****::**:*.**. ..  .*  :  *   ::

AT5G47220.1     PAVKVEPTENFTAMEEKPKKAIPVTETAV---KAKHYRGVRQRPWGKFAAEIRDPAKNGA
pt032748_POPTR_ PAVKLEPSENLTI--SPPRTEAPIAEPAVVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGA
                ****:**:**:*   . *:.  *::*.**   *.**************************

AT5G47220.1     RVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSS
pt032748_POPTR_ RVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPAPVRVTSKRSSPERSSSV
                ****************** **:******************** ***:******.. *** 

AT5G47220.1     SSTSSSENGKLKRRRKAENL-TSEVVQ---------VKCEVGDETRVDELLVS
pt032748_POPTR_ ESAS------LKRKKVGGTAGTATVVPQAGLEMRNGVGCQVG--THGEQLLVI
                .*:*      ***:: . .  *: **          * *:**  *: ::***
BoxShade v3.31 C (beta, 970507) Output
AT5G47220.1     M Y G Q C N I - E S D Y A L L E S I T R H L L G G G G E - - - - - - - - N E L R L N E - - - - - - - S T P S S - - - - -
pt032748_POPTR_    M Y G E N F L D Q S D Y A F L E S V R M H L L G E P T S P T T A S S C F N P A S T N S A M S A A A A T T P A T C T P V P
 
AT5G47220.1     - - - - - - - - - - - - - C F T E S W G G L P L K E N D S E D M L V Y G L L K D A F H F D T S S S D L S C L F - - - D F
pt032748_POPTR_    V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y G V L S D A V T V G W V P S L K T D Q F I E P N L
 
AT5G47220.1     P A V K V E P T E N F T A M E E K P K K A I P V T E T A V - - - K A K H Y R G V R Q R P W G K F A A E I R D P A K N G A
pt032748_POPTR_    P A V K L E P S E N L T I - - S P P R T E A P I A E P A V V P S K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A
 
AT5G47220.1     R V W L G T F E T A E D A A L A Y D I A A F R M R G S R A L L N F P L R V N S G E P D P V R I T S K R S S S S S S S S S
pt032748_POPTR_    R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P A P V R V T S K R S S P E R S S S V
 
AT5G47220.1     S S T S S S E N G K L K R R R K A E N L - T S E V V Q - - - - - - - - - V K C E V G D E T R V D E L L V S
pt032748_POPTR_    E S A S - - - - - - L K R K K V G G T A G T A T V V P Q A G L E M R N G V G C Q V G - - T H G E Q L L V I
 
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