fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009912 not found in 280aa AT4G17500.1 1st_not 0.477722772 II
Pt032748 not found in 283aa AT4G17500.1 not_not 0.470297029 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47220.1     MYGQCNI-ESDYALLESITRHLLGGGGENELRLNES-----------------TPSS---
pt032748_POPTR_ MYGENFLDQSDYAFLESVRMHLLGE--PTSPTTASSCFNPASTNSAMSAAAATTPATCTP
pt009912_POPTR_ MYGQSLLDQPDYAFLDPVRLHLQGETVSTAPTTTCS-YTPAITTTTAAPAANYTP----P
                ***:  : :.***:*:.:  ** *    .      *                 **     

AT5G47220.1     ---------------CFTESWGGLPLKENDSEDMLVYGLLKDAFHFD---TSSSDLSCLF
pt032748_POPTR_ VPVYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYGVLSDAVTVGWVPSLKTDQFIEP
pt009912_POPTR_ L-VYCRSTSFSSLYPCLTENWGDLPLKVDDSEDMFLYAVLRDAVTVGWVPSLKTDQLVQP
                               *:**.**.**** :*****::*.:* **. ..   : .:*     

AT5G47220.1     DFPAVKVEPTENFTAMEEKPKKAIPVTETAV---KAKHYRGVRQRPWGKFAAEIRDPAKN
pt032748_POPTR_ NLPAVKLEPSENLTI--SPPRTEAPIAEPAVVPSKGKHYRGVRQRPWGKFAAEIRDPAKN
pt009912_POPTR_ NFPLVKLEPTENLAV--SPPSTAVPVAEPAVLPSKGKHYRGVRQRPWGKFAAEIRDPAKN
                ::* **:**:**::   . * .  *::*.**   *.************************

AT5G47220.1     GARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSS
pt032748_POPTR_ GARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPAPVRVTSKRSSPERSS
pt009912_POPTR_ GARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPEPSS
                ******************** **:******************** ***:******.. **

AT5G47220.1     SSSSTSSSENGKLKRRRKAENL--TSEVVQ---------VKCEVGDETRVDELLVS
pt032748_POPTR_ SVESAS------LK-RKKVGGTAGTATVVPQAGLEMRNGVGCQVG--THGEQLLVI
pt009912_POPTR_ SVDSGS------PKRRKKVGGTAGAATVVAKAGLEIGNGVGCQVG--THGEQMLVI
                * .* *       * *:*. .   :: **          * *:**  *: :::**
BoxShade v3.31 C (beta, 970507) Output
AT5G47220.1     M Y G Q C N I - E S D Y A L L E S I T R H L L G G G G E N E L R L N E S - - - - - - - - - - - - - - - - - T P S S - - -
pt032748_POPTR_    M Y G E N F L D Q S D Y A F L E S V R M H L L G E - - P T S P T T A S S C F N P A S T N S A M S A A A A T T P A T C T P
pt009912_POPTR_    M Y G Q S L L D Q P D Y A F L D P V R L H L Q G E T V S T A P T T T C S - Y T P A I T T T T A A P A A N Y T P - - - - P
 
AT5G47220.1     - - - - - - - - - - - - - - - C F T E S W G G L P L K E N D S E D M L V Y G L L K D A F H F D - - - T S S S D L S C L F
pt032748_POPTR_    V P V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y G V L S D A V T V G W V P S L K T D Q F I E P
pt009912_POPTR_    L - V Y C R S T S F S S L Y P C L T E N W G D L P L K V D D S E D M F L Y A V L R D A V T V G W V P S L K T D Q L V Q P
 
AT5G47220.1     D F P A V K V E P T E N F T A M E E K P K K A I P V T E T A V - - - K A K H Y R G V R Q R P W G K F A A E I R D P A K N
pt032748_POPTR_    N L P A V K L E P S E N L T I - - S P P R T E A P I A E P A V V P S K G K H Y R G V R Q R P W G K F A A E I R D P A K N
pt009912_POPTR_    N F P L V K L E P T E N L A V - - S P P S T A V P V A E P A V L P S K G K H Y R G V R Q R P W G K F A A E I R D P A K N
 
AT5G47220.1     G A R V W L G T F E T A E D A A L A Y D I A A F R M R G S R A L L N F P L R V N S G E P D P V R I T S K R S S S S S S S
pt032748_POPTR_    G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P A P V R V T S K R S S P E R S S
pt009912_POPTR_    G A R V W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P D P V R V T S K R S S P E P S S
 
AT5G47220.1     S S S S T S S S E N G K L K R R R K A E N L - - T S E V V Q - - - - - - - - - V K C E V G D E T R V D E L L V S
pt032748_POPTR_    S V E S A S - - - - - - L K - R K K V G G T A G T A T V V P Q A G L E M R N G V G C Q V G - - T H G E Q L L V I
pt009912_POPTR_    S V D S G S - - - - - - P K R R K K V G G T A G A A T V V A K A G L E I G N G V G C Q V G - - T H G E Q M L V I
 
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