fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047103 not found in 251aa AT4G17500.1 1st_not 0.487623762 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47220.1     MYGQCN-IESDYALLESITRHLLGGGGENELRLNE-----------STPSSCFTESWGGL
gm047103_Glyma1 MYGRSDSYESDLALLDSIRRHLL---GESELIFGAPNFGSGRSSSFSSLDSCLSDDWGEL
                ***:.:  *** ***:** ****   **.** :.            *: .**:::.** *

AT5G47220.1     PLKENDSEDMLVYGLLKDAFH------FDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPK
gm047103_Glyma1 PFKEDDSEDMVLYGVLRDAVNVGWVPSLDAGSPE-SVSSGFPAVKLEPDVMPALINPCPP
                *:**:*****::**:*:**.:      :*:.*.: *   .*****:**    : ::  * 

AT5G47220.1     KAIPVTETAV---KAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDI
gm047103_Glyma1 PAPAVEEKKVVPPKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDR
                 * .* *. *   *.******************************************** 

AT5G47220.1     AAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAEN
gm047103_Glyma1 AAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSSPESMAAAA---------PKRKKVMV
                **:************************:*******..* ::::          :*:*.  

AT5G47220.1     LTSEVVQVKCEVGDETRVDELLVS
gm047103_Glyma1 VGTVQEQVGSQVVECTRGEQLLVS
                : :   ** .:* : ** ::****
BoxShade v3.31 C (beta, 970507) Output
AT5G47220.1     M Y G Q C N - I E S D Y A L L E S I T R H L L G G G G E N E L R L N E - - - - - - - - - - - S T P S S C F T E S W G G L
gm047103_Glyma1    M Y G R S D S Y E S D L A L L D S I R R H L L - - - G E S E L I F G A P N F G S G R S S S F S S L D S C L S D D W G E L
 
AT5G47220.1     P L K E N D S E D M L V Y G L L K D A F H - - - - - - F D T S S S D L S C L F D F P A V K V E P T E N F T A M E E K P K
gm047103_Glyma1    P F K E D D S E D M V L Y G V L R D A V N V G W V P S L D A G S P E - S V S S G F P A V K L E P D V M P A L I N P C P P
 
AT5G47220.1     K A I P V T E T A V - - - K A K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D I
gm047103_Glyma1    P A P A V E E K K V V P P K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V W L G T F E T A E D A A L A Y D R
 
AT5G47220.1     A A F R M R G S R A L L N F P L R V N S G E P D P V R I T S K R S S S S S S S S S S S T S S S E N G K L K R R R K A E N
gm047103_Glyma1    A A Y R M R G S R A L L N F P L R V N S G E P D P V R V T S K R S S S P E S M A A A A - - - - - - - - - P K R K K V M V
 
AT5G47220.1     L T S E V V Q V K C E V G D E T R V D E L L V S
gm047103_Glyma1    V G T V Q E Q V G S Q V V E C T R G E Q L L V S
 
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