fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011461 not found in 255aa AT4G17500.1 not_not 0.475247524 III
Gm002107 not found in 274aa AT4G17500.1 not_not 0.462871287 III
Gm029721 not found in 240aa AT4G17500.1 not_not 0.445544554 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47220.1     MYGQ-----CNIESDYALLESITRHLLG------------GGGENELRLNESTPSS---C
gm029721_Glyma1 MYGQ-----SCYESDLALLDSIRRHLLGDSEEHRFGAPNVNSGSTPLYSRSSSFGRLYPC
gm011461_Glyma0 MYGQSSSSSSSYESDLALLDSIRHHLLGESES-IFGAPNFGSG------RSSSFSSLDSC
gm002107_Glyma0 MYGQ-----SSYESDLALLDSIRRHLLGDSEEHKFGAPNVSSGNTPAYSRSSCFSRLYPC
                ****     .  *** ***:** :****            ..*      ..*  .    *

AT5G47220.1     FTESWGGLPLKENDSEDMLVYGLLKDAFH------FDTSSSDLSCLFDF-PA--VKVEPT
gm029721_Glyma1 LSNDWGELPLMEDDSEDMLLYGVLRDAVNVGWVPSLDASSPE-SFSSAFMPPVTVKSET-
gm011461_Glyma0 LSDNWGELPFKEDDTEDMVLYGVLRDAVNVGWVPSLDAGSPE-SVSSGF-PA--VKLEP-
gm002107_Glyma0 LSNDWGELPLKEDDSEDMLLYGVLRDAINAGWVPSLDASSPE-SFSSGFIPAVTVKSEP-
                :::.** **: *:*:***::**:*:**.:      :*:.*.: *    * *.  ** *. 

AT5G47220.1     ENFTAMEE---------KPKKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARV
gm029721_Glyma1 DLFPAPEPICNPPVVQGPAPAVVP-----AKGKHYRGVRQRPWGKFAAEIRDPAKNGARV
gm011461_Glyma0 DLMPALISPCPPPAAAAEEKKVVP-----AKGKHYRGVRQRPWGKFAAEIRDPAKNGARV
gm002107_Glyma0 DLFPAPEPVYIPPAAQKAEPAVVP-----AKGKHYRGVRQRPWGKFAAEIRDPAKNGARV
                : :.*                .:*     .*.****************************

AT5G47220.1     WLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSS----SSSSS
gm029721_Glyma1 WLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTAKRASAEP-CSSSE
gm011461_Glyma0 WLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVKSKR------SSSPE
gm002107_Glyma0 WLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTAKRYSPEPSSSSSD
                **************** **:**************:*****:***:.:**      .**..

AT5G47220.1     SSSSTSSSENGKLKRRRKAEN------LTSEVVQVKCEVGDETRVDELLVS---
gm029721_Glyma1 SGSWV--------KKRKKVVG---------------------------------
gm011461_Glyma0 SAAALP-------AKRKKVVV------VGTVQEQVGSQVAECTRGEQLLVS---
gm002107_Glyma0 SASST--------KRRKKVVGSTVTAQSGLRKEQVGSQVAHSAHVESSCWSTNA
                *.:           :*:*.
BoxShade v3.31 C (beta, 970507) Output
AT5G47220.1     M Y G Q - - - - - C N I E S D Y A L L E S I T R H L L G - - - - - - - - - - - - G G G E N E L R L N E S T P S S - - - C
gm029721_Glyma1    M Y G Q - - - - - S C Y E S D L A L L D S I R R H L L G D S E E H R F G A P N V N S G S T P L Y S R S S S F G R L Y P C
gm011461_Glyma0    M Y G Q S S S S S S S Y E S D L A L L D S I R H H L L G E S E S - I F G A P N F G S G - - - - - - R S S S F S S L D S C
gm002107_Glyma0    M Y G Q - - - - - S S Y E S D L A L L D S I R R H L L G D S E E H K F G A P N V S S G N T P A Y S R S S C F S R L Y P C
 
AT5G47220.1     F T E S W G G L P L K E N D S E D M L V Y G L L K D A F H - - - - - - F D T S S S D L S C L F D F - P A - - V K V E P T
gm029721_Glyma1    L S N D W G E L P L M E D D S E D M L L Y G V L R D A V N V G W V P S L D A S S P E - S F S S A F M P P V T V K S E T -
gm011461_Glyma0    L S D N W G E L P F K E D D T E D M V L Y G V L R D A V N V G W V P S L D A G S P E - S V S S G F - P A - - V K L E P -
gm002107_Glyma0    L S N D W G E L P L K E D D S E D M L L Y G V L R D A I N A G W V P S L D A S S P E - S F S S G F I P A V T V K S E P -
 
AT5G47220.1     E N F T A M E E - - - - - - - - - K P K K A I P V T E T A V K A K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V
gm029721_Glyma1    D L F P A P E P I C N P P V V Q G P A P A V V P - - - - - A K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V
gm011461_Glyma0    D L M P A L I S P C P P P A A A A E E K K V V P - - - - - A K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V
gm002107_Glyma0    D L F P A P E P V Y I P P A A Q K A E P A V V P - - - - - A K G K H Y R G V R Q R P W G K F A A E I R D P A K N G A R V
 
AT5G47220.1     W L G T F E T A E D A A L A Y D I A A F R M R G S R A L L N F P L R V N S G E P D P V R I T S K R S S - - - - S S S S S
gm029721_Glyma1    W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R I N S G E P E P V R V T A K R A S A E P - C S S S E
gm011461_Glyma0    W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R V N S G E P D P V R V K S K R - - - - - - S S S P E
gm002107_Glyma0    W L G T F E T A E D A A L A Y D R A A Y R M R G S R A L L N F P L R I N S G E P E P V R V T A K R Y S P E P S S S S S D
 
AT5G47220.1     S S S S T S S S E N G K L K R R R K A E N - - - - - - L T S E V V Q V K C E V G D E T R V D E L L V S - - -
gm029721_Glyma1    S G S W V - - - - - - - - K K R K K V V G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011461_Glyma0    S A A A L P - - - - - - - A K R K K V V V - - - - - - V G T V Q E Q V G S Q V A E C T R G E Q L L V S - - -
gm002107_Glyma0    S A S S T - - - - - - - - K R R K K V V G S T V T A Q S G L R K E Q V G S Q V A H S A H V E S S C W S T N A
 
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