fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011460 not found in 278aa AT5G47230.1 1st_1st 0.365566037 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47230.1     MATPNEVSALWFIEKHLLDEASPVATDPWMKHESS--SATESS-SDSSSIIFGSSSSSF-
gm011460_Glyma0 MANAAEVSALKRIKLHLLGELSPLAT-PQNKFDQTNPSPSESSNSESSSISLNHYFTDLL
                **.. *****  *: ***.* **:** *  *.:.:  *.:*** *:**** :.   :.: 

AT5G47230.1     -APIDFS--ESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSVSDFDFKPSNQNQNQFEPEL
gm011460_Glyma0 EPEIEFPLFEFDSKPQVIDLETPKTL---------------------ISAEKKPQFN---
                 . *:*.  *  .**::***:**:::                      * ::: **:   

AT5G47230.1     KSQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRD
gm011460_Glyma0 ----RKPSLLIAVPKKTEWIQFG----NPEVAAPENQPEKKHYRGVRQRPWGKFAAEIRD
                    ***.* *::* *******.    :***: * .: **********************

AT5G47230.1     PNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPR----ADEGEKK
gm011460_Glyma0 PNKRGSRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEVNTAAETVSVAAVDVERK
                ********************:***.******************..        * : *:*

AT5G47230.1     RKRDDDEKVTV-VEKVLKTEQSV--DVNGGETFPFVTSNLTELCDWDLTGFLNFPLLSPL
gm011460_Glyma0 RRREEEEVVVEDVKAVVKKEKITEHDVSCFRGMPLTPSMWTGFWDSDVKDIFNIPPLSPL
                *:*:::* *.  *: *:*.*: .  **.  . :*:..*  * : * *:..::*:* ****

AT5G47230.1     SPHPPFGYSQLTVV
gm011460_Glyma0 S---PFGFSPLVAV
                *   ***:* *..*
BoxShade v3.31 C (beta, 970507) Output
AT5G47230.1     M A T P N E V S A L W F I E K H L L D E A S P V A T D P W M K H E S S - - S A T E S S - S D S S S I I F G S S S S S F -
gm011460_Glyma0    M A N A A E V S A L K R I K L H L L G E L S P L A T - P Q N K F D Q T N P S P S E S S N S E S S S I S L N H Y F T D L L
 
AT5G47230.1     - A P I D F S - - E S V C K P E I I D L D T P R S M E F L S I P F E F D S E V S V S D F D F K P S N Q N Q N Q F E P E L
gm011460_Glyma0    E P E I E F P L F E F D S K P Q V I D L E T P K T L - - - - - - - - - - - - - - - - - - - - - I S A E K K P Q F N - - -
 
AT5G47230.1     K S Q I R K P P L K I S L P A K T E W I Q F A A E N T K P E V T K P V S E E E K K H Y R G V R Q R P W G K F A A E I R D
gm011460_Glyma0    - - - - R K P S L L I A V P K K T E W I Q F G - - - - N P E V A A P E N Q P E K K H Y R G V R Q R P W G K F A A E I R D
 
AT5G47230.1     P N K R G S R V W L G T F D T A I E A A R A Y D E A A F R L R G S K A I L N F P L E V G K W K P R - - - - A D E G E K K
gm011460_Glyma0    P N K R G S R V W L G T F D T A I E A A K A Y D R A A F R L R G S K A I L N F P L E V N T A A E T V S V A A V D V E R K
 
AT5G47230.1     R K R D D D E K V T V - V E K V L K T E Q S V - - D V N G G E T F P F V T S N L T E L C D W D L T G F L N F P L L S P L
gm011460_Glyma0    R R R E E E E V V V E D V K A V V K K E K I T E H D V S C F R G M P L T P S M W T G F W D S D V K D I F N I P P L S P L
 
AT5G47230.1     S P H P P F G Y S Q L T V V
gm011460_Glyma0    S - - - P F G F S P L V A V
 
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