fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47370.1 MMGKEDLGLSLSLGFS at 6/283 in AT5G47370.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029715 TVEKEDLGLSLSLSFP in 7/285 AT4G16780.1 1st_not 0.530266343 II
QNPPTHLHLNLVSSSP in 23/285
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47370.1     MMMGKEDLGLSLSLGFSQN---HNPLQMNLNPNSSLSNNLQRLPWNQTFDP---TSDLRK
gm029715_Glyma1 MTVEKEDLGLSLSLSFPQNPPTH--LHLNLVSSSPSSHNPQKPSWNDPFTSSAGSSFLRG
                * : **********.*.**   *  *::** ..*. *:* *: .**:.* .   :* ** 

AT5G47370.1     IDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYS
gm029715_Glyma1 IDVNRLPSVVDCEEEAGVSSPNSTVSS-VSGKRSEREEANG---------EENDTDRACS
                **** :**.*:***::********:** :********  .*         :*  .**. *

AT5G47370.1     RGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVW
gm029715_Glyma1 RGIISDEED-AETSRKKLRLSKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVW
                **  .:*** .************** :***:*****************:*.* *******

AT5G47370.1     FQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTL
gm029715_Glyma1 FQNRRARTKLKQTEVDCEFLKRCCENLTVENRRLQKEVQELRALKLSPQFYMHMTPPTTL
                ******************:**** *:** ********. ***:******** :*******

AT5G47370.1     IMCPSCERVGGPSSS------NHHH----NHRPVSINPWVACAGQVAHGLNFEALRPRS
gm029715_Glyma1 TMCPSCERVAVPPSSAVDPAMRHHHVPPTQPRAFPIGPWATAAATIPH-RPFDALRRRS
                 ********. *.**      .***    : *...*.**.:.*. :.*   *:*** **
BoxShade v3.31 C (beta, 970507) Output
AT5G47370.1     M M M G K E D L G L S L S L G F S Q N - - - H N P L Q M N L N P N S S L S N N L Q R L P W N Q T F D P - - - T S D L R K
gm029715_Glyma1    M T V E K E D L G L S L S L S F P Q N P P T H - - L H L N L V S S S P S S H N P Q K P S W N D P F T S S A G S S F L R G
 
AT5G47370.1     I D V N S F P S T V N C E E D T G V S S P N S T I S S T I S G K R S E R E G I S G T G V G S G D D H D E I T P D R G Y S
gm029715_Glyma1    I D V N R L P S V V D C E E E A G V S S P N S T V S S - V S G K R S E R E E A N G - - - - - - - - - E E N D T D R A C S
 
AT5G47370.1     R G T S D E E E D G G E T S R K K L R L S K D Q S A F L E E T F K E H N T L N P K Q K L A L A K K L N L T A R Q V E V W
gm029715_Glyma1    R G I I S D E E D - A E T S R K K L R L S K D Q S I I L E E S F K E H N T L N P K Q K L A L A K Q L G L R A R Q V E V W
 
AT5G47370.1     F Q N R R A R T K L K Q T E V D C E Y L K R C V E K L T E E N R R L Q K E A M E L R T L K L S P Q F Y G Q M T P P T T L
gm029715_Glyma1    F Q N R R A R T K L K Q T E V D C E F L K R C C E N L T V E N R R L Q K E V Q E L R A L K L S P Q F Y M H M T P P T T L
 
AT5G47370.1     I M C P S C E R V G G P S S S - - - - - - N H H H - - - - N H R P V S I N P W V A C A G Q V A H G L N F E A L R P R S
gm029715_Glyma1    T M C P S C E R V A V P P S S A V D P A M R H H H V P P T Q P R A F P I G P W A T A A A T I P H - R P F D A L R R R S
 
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