fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47390.1 PNRGVKLFGVRLTEG at 23/365 in AT5G47390.1
GESDQSLSLKLGGGSS at 330/365 in AT5G47390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm022188 PDRGVRLFGVRLTEG in 24/153 AT5G47390.1 1st_1st 0.398181818 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47390.1     MTRRCSHCNHNGHNSRTCPNRGVKLFGVRLTEGSIRKSASMGNLSHYTGSGSGGHGTGSN
Sm022188_Selmo1 MTRKCSHCGHNGHNSRTCPDRGVRLFGVRLTEG-MRKSASMGNLLHYNPSAV--------
                ***:****.**********:***:********* :********* **. *.         

AT5G47390.1     TPGSPGDVPDHVAGDGYASEDFVAGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRG
Sm022188_Selmo1 TP-EPSD--SGAIADGYVSDGLVQTSSNARERKKGVPWTEEEHRCFLLGLQKLGKGDWRG
                ** .*.*  . . .***.*:.:*  **.:******.******** ***************

AT5G47390.1     ISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPDEVGDIPMDLQEPEEDNI
Sm022188_Selmo1 IAKNFVTTRTPTQVASHAQKYFIRQSNLSKRKRRSSLFDISPEVV---------------
                *::*:**********************:*:*********: *: *               

AT5G47390.1     PVETEMQGADSIHQTLAPSSLHAPSILEIEECESMDSTNSTTGEPTATAAAASSSSRLEE
Sm022188_Selmo1 ------------------------------------------------------------
                                                                            

AT5G47390.1     TTQLQSQLQPQPQLPGSFPILYPTYFSPYYPFPFPIWPAGYVPEPPKKEETHEILRPTAV
Sm022188_Selmo1 ------------------------------------------------------------
                                                                            

AT5G47390.1     HSKAPINVDELLGMSKLSLAESNKHGESDQSLSLKLGGGSSSRQSAFHPNPSSDSSDIKS
Sm022188_Selmo1 ------------------------------------------------------------
                                                                            

AT5G47390.1     VIHAL
Sm022188_Selmo1 -----
BoxShade v3.31 C (beta, 970507) Output
AT5G47390.1     M T R R C S H C N H N G H N S R T C P N R G V K L F G V R L T E G S I R K S A S M G N L S H Y T G S G S G G H G T G S N
Sm022188_Selmo1    M T R K C S H C G H N G H N S R T C P D R G V R L F G V R L T E G - M R K S A S M G N L L H Y N P S A V - - - - - - - -
 
AT5G47390.1     T P G S P G D V P D H V A G D G Y A S E D F V A G S S S S R E R K K G T P W T E E E H R M F L L G L Q K L G K G D W R G
Sm022188_Selmo1    T P - E P S D - - S G A I A D G Y V S D G L V Q T S S N A R E R K K G V P W T E E E H R C F L L G L Q K L G K G D W R G
 
AT5G47390.1     I S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D M V P D E V G D I P M D L Q E P E E D N I
Sm022188_Selmo1    I A K N F V T T R T P T Q V A S H A Q K Y F I R Q S N L S K R K R R S S L F D I S P E V V - - - - - - - - - - - - - - -
 
AT5G47390.1     P V E T E M Q G A D S I H Q T L A P S S L H A P S I L E I E E C E S M D S T N S T T G E P T A T A A A A S S S S R L E E
Sm022188_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G47390.1     T T Q L Q S Q L Q P Q P Q L P G S F P I L Y P T Y F S P Y Y P F P F P I W P A G Y V P E P P K K E E T H E I L R P T A V
Sm022188_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G47390.1     H S K A P I N V D E L L G M S K L S L A E S N K H G E S D Q S L S L K L G G G S S S R Q S A F H P N P S S D S S D I K S
Sm022188_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G47390.1     V I H A L
Sm022188_Selmo1    - - - - -
 
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