fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47390.1 PNRGVKLFGVRLTEG at 23/365 in AT5G47390.1
GESDQSLSLKLGGGSS at 330/365 in AT5G47390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028573 PLSGVKLFGVRLTDG in 36/369 AT3G16350.1 not_not 0.432727272 III
VDALPSLNLSLKPEFE in 205/369
Pt028574 PLSGVKLFGVRLTDG in 36/367 AT3G16350.1 not_not 0.432727272 III
VDALPSLNLSLKPEFE in 205/367
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47390.1     MTRRCSHCNHNGHNSRTCPNR------------GVKLFGVRLTEGS-IRKSASMGNLS-H
pt028573_POPTR_ MTRRCSHCSNNGHNSRTCPTRSSLASSSSSPLSGVKLFGVRLTDGSIIKKSASMGNLSAH
pt028574_POPTR_ MTRRCSHCSNNGHNSRTCPTRSSLASSSSSPLSGVKLFGVRLTDGSIIKKSASMGNLSAH
                ********.:*********.*            **********:** *:********* *

AT5G47390.1     YTGSGSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSR----ERKKGTPWTEEE
pt028573_POPTR_ YHSSSSAA---ASPNPDSP--VSDRVHDDGYLSDDPAAHASCSTSRRGDRKKGVPWTEEE
pt028574_POPTR_ YHSSSSAA---ASPNPDSP--VSDRVHDDGYLSDDPAAHASCSTSRRGDRKKGVPWTEEE
                * .*.*..   .* .*.**  *.*:* .*** *:* .* :*.*     :****.******

AT5G47390.1     HRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVP
pt028573_POPTR_ HRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKFFIRQSNATRRKRRSSLFDMVP
pt028574_POPTR_ HRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKFFIRQSNATRRKRRSSLFDMVP
                **:**:*************:**:*.:************:******.:*************

AT5G47390.1     DEVGDIPMDLQEPEEDNIPVETEMQGAD-------SIHQTLAPSSLHAPSILEIEECESM
pt028573_POPTR_ EMVYPQPV----PEEQELP--SSQAGDDDNVDALPSLNLSLKP------------EFEPM
pt028574_POPTR_ EMVYPQPV----PEEQELP--SSQAGDDDNVDALPSLNLSLKP------------EFEPM
                : *   *:    ***:::*  :.  * *       *:: :* *            * *.*

AT5G47390.1     DS-TNSTTGEPTATAAAASSSSRLEETTQLQSQLQPQPQLPGS---FPIL--------YP
pt028573_POPTR_ DTESQELVKERDKTVMGFS---------------EFKPSVPSSSEFVPIVSGSNEFTAVP
pt028574_POPTR_ DTESQELVKERDKTVMGFS---------------EFKPSVPSSSEFVPIVSGSNEFTAVP
                *: ::. . *   *. . *               : :*.:*.*   .**:         *

AT5G47390.1     TYFSPYYPFPFPIWPAGYVP-EPPKKEET--HEILRPTAVHSKAPINVDELLGMSKLSLA
pt028573_POPTR_ GFFPAYMPVPYPYWAPNTTPFEEGKGAATSHHEVLKPVPSILKEPFNVDELVGMSHLSLG
pt028574_POPTR_ GFFPAYMPVPYPYWAPNTTPFEEGKGAATSHHEVLKPVPSILKEPFNVDELVGMSHLSLG
                 :*..* *.*:* *... .* *  *   *  **:*:*..   * *:*****:***:***.

AT5G47390.1     ESNKHGESDQSLSLKLGGGSSSRQSAFHPNPSSDSSDIKS-VIHAL--
pt028573_POPTR_ EIERRHREPSPLSLKL-IGEAPRQSAFHASAPASGSDLSNGGTKRLNS
pt028574_POPTR_ EIERRHREPSPLSLKL-IGEAPRQSAFHASAPASGSDLS--GTKRLNS
                * ::: .. ..*****  *.:.******....:..**:.    : *
BoxShade v3.31 C (beta, 970507) Output
AT5G47390.1     M T R R C S H C N H N G H N S R T C P N R - - - - - - - - - - - - G V K L F G V R L T E G S - I R K S A S M G N L S - H
pt028573_POPTR_    M T R R C S H C S N N G H N S R T C P T R S S L A S S S S S P L S G V K L F G V R L T D G S I I K K S A S M G N L S A H
pt028574_POPTR_    M T R R C S H C S N N G H N S R T C P T R S S L A S S S S S P L S G V K L F G V R L T D G S I I K K S A S M G N L S A H
 
AT5G47390.1     Y T G S G S G G H G T G S N T P G S P G D V P D H V A G D G Y A S E D F V A G S S S S R - - - - E R K K G T P W T E E E
pt028573_POPTR_    Y H S S S S A A - - - A S P N P D S P - - V S D R V H D D G Y L S D D P A A H A S C S T S R R G D R K K G V P W T E E E
pt028574_POPTR_    Y H S S S S A A - - - A S P N P D S P - - V S D R V H D D G Y L S D D P A A H A S C S T S R R G D R K K G V P W T E E E
 
AT5G47390.1     H R M F L L G L Q K L G K G D W R G I S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D M V P
pt028573_POPTR_    H R L F L I G L Q K L G K G D W R G I A R N F V V S R T P T Q V A S H A Q K F F I R Q S N A T R R K R R S S L F D M V P
pt028574_POPTR_    H R L F L I G L Q K L G K G D W R G I A R N F V V S R T P T Q V A S H A Q K F F I R Q S N A T R R K R R S S L F D M V P
 
AT5G47390.1     D E V G D I P M D L Q E P E E D N I P V E T E M Q G A D - - - - - - - S I H Q T L A P S S L H A P S I L E I E E C E S M
pt028573_POPTR_    E M V Y P Q P V - - - - P E E Q E L P - - S S Q A G D D D N V D A L P S L N L S L K P - - - - - - - - - - - - E F E P M
pt028574_POPTR_    E M V Y P Q P V - - - - P E E Q E L P - - S S Q A G D D D N V D A L P S L N L S L K P - - - - - - - - - - - - E F E P M
 
AT5G47390.1     D S - T N S T T G E P T A T A A A A S S S S R L E E T T Q L Q S Q L Q P Q P Q L P G S - - - F P I L - - - - - - - - Y P
pt028573_POPTR_    D T E S Q E L V K E R D K T V M G F S - - - - - - - - - - - - - - - E F K P S V P S S S E F V P I V S G S N E F T A V P
pt028574_POPTR_    D T E S Q E L V K E R D K T V M G F S - - - - - - - - - - - - - - - E F K P S V P S S S E F V P I V S G S N E F T A V P
 
AT5G47390.1     T Y F S P Y Y P F P F P I W P A G Y V P - E P P K K E E T - - H E I L R P T A V H S K A P I N V D E L L G M S K L S L A
pt028573_POPTR_    G F F P A Y M P V P Y P Y W A P N T T P F E E G K G A A T S H H E V L K P V P S I L K E P F N V D E L V G M S H L S L G
pt028574_POPTR_    G F F P A Y M P V P Y P Y W A P N T T P F E E G K G A A T S H H E V L K P V P S I L K E P F N V D E L V G M S H L S L G
 
AT5G47390.1     E S N K H G E S D Q S L S L K L G G G S S S R Q S A F H P N P S S D S S D I K S - V I H A L - -
pt028573_POPTR_    E I E R R H R E P S P L S L K L - I G E A P R Q S A F H A S A P A S G S D L S N G G T K R L N S
pt028574_POPTR_    E I E R R H R E P S P L S L K L - I G E A P R Q S A F H A S A P A S G S D L S - - G T K R L N S
 
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