fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47390.1 PNRGVKLFGVRLTEG at 23/365 in AT5G47390.1
GESDQSLSLKLGGGSS at 330/365 in AT5G47390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000774 GGGGVRLFGVRLTSP in 31/366 AT3G16350.1 not_not 0.401818181 III
SIEPSALSLQLTGPTN in 328/366
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47390.1     MTRRCSHCNHNGHNSRTCPNR-------GVKLFGVRLT---EGSIRKSASMGNLSHYTGS
Os000774_Os01t0 MTRRCSHCSNNGHNARTCPARGGGGGGGGVRLFGVRLTSPPEVAMKKSASMSCIASSLGS
                ********.:****:**** *       **:*******   * :::*****. ::   **

AT5G47390.1     GSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSR---ERKKGTPWTEEEHRMFL
Os000774_Os01t0 GGGSGGSSPAGTGRGGGGGGEGAA-GYASDDPTHASCSTNGRGERKKGTPWTEEEHRMFL
                *.*. *:..  .*  *.  .. *. ****:* . .*.*:.   *****************

AT5G47390.1     LGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPDEVGD
Os000774_Os01t0 MGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMVP----E
                :****************:*.:*****************:* **************    :

AT5G47390.1     IPMDLQEPEEDNIPVETEMQGADSIHQTL--APSSLHAP----------------SILEI
Os000774_Os01t0 MPMD-----ESPVVVEQLM-----LHSTQDEATSSNQLPISHLVKQKEPEFARHLSDLQL
                :***     *. : **  *     :*.*   *.** : *                * *::

AT5G47390.1     EECESMDSTNSTTGEPTATAAAASSSSRLEETTQLQSQLQPQPQLPGSFPILYPTYFSPY
Os000774_Os01t0 RKHEESEFT-----EPSLAA--------------LDLEMNHAAPFKTKFVLTMPTFYPAL
                .: *. : *     **: :*              *: :::  . :  .* :  **::.. 

AT5G47390.1     YPFPFPIWPAGYVPEPPKKEETHEILRPTAVHSKAPIN-VDELLGMSKLSLAESNKHGES
Os000774_Os01t0 IPVPLTLWPPN-VANVGESGTNHEILKPTPVNGKEVINKADEVVGMSKLTIGDGSSNSIE
                 *.*:.:**.. *.:  :.  .****:**.*:.*  ** .**::*****::.:...:. .

AT5G47390.1     DQSLSLKLGGGSSSRQSAFHPNPSSDSSDI----KSVIHAL
Os000774_Os01t0 PSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNNSPIHAV
                 .:***:* * :.:****** **.  ..*:    :* ***:
BoxShade v3.31 C (beta, 970507) Output
AT5G47390.1     M T R R C S H C N H N G H N S R T C P N R - - - - - - - G V K L F G V R L T - - - E G S I R K S A S M G N L S H Y T G S
Os000774_Os01t0    M T R R C S H C S N N G H N A R T C P A R G G G G G G G G V R L F G V R L T S P P E V A M K K S A S M S C I A S S L G S
 
AT5G47390.1     G S G G H G T G S N T P G S P G D V P D H V A G D G Y A S E D F V A G S S S S R - - - E R K K G T P W T E E E H R M F L
Os000774_Os01t0    G G G S G G S S P A G T G R G G G G G G E G A A - G Y A S D D P T H A S C S T N G R G E R K K G T P W T E E E H R M F L
 
AT5G47390.1     L G L Q K L G K G D W R G I S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D M V P D E V G D
Os000774_Os01t0    M G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q T N S S R R K R R S S L F D M V P - - - - E
 
AT5G47390.1     I P M D L Q E P E E D N I P V E T E M Q G A D S I H Q T L - - A P S S L H A P - - - - - - - - - - - - - - - - S I L E I
Os000774_Os01t0    M P M D - - - - - E S P V V V E Q L M - - - - - L H S T Q D E A T S S N Q L P I S H L V K Q K E P E F A R H L S D L Q L
 
AT5G47390.1     E E C E S M D S T N S T T G E P T A T A A A A S S S S R L E E T T Q L Q S Q L Q P Q P Q L P G S F P I L Y P T Y F S P Y
Os000774_Os01t0    R K H E E S E F T - - - - - E P S L A A - - - - - - - - - - - - - - L D L E M N H A A P F K T K F V L T M P T F Y P A L
 
AT5G47390.1     Y P F P F P I W P A G Y V P E P P K K E E T H E I L R P T A V H S K A P I N - V D E L L G M S K L S L A E S N K H G E S
Os000774_Os01t0    I P V P L T L W P P N - V A N V G E S G T N H E I L K P T P V N G K E V I N K A D E V V G M S K L T I G D G S S N S I E
 
AT5G47390.1     D Q S L S L K L G G G S S S R Q S A F H P N P S S D S S D I - - - - K S V I H A L
Os000774_Os01t0    P S A L S L Q L T G P T N T R Q S A F H V N P P M A G P D L N K R N N S P I H A V
 
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