fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47390.1 PNRGVKLFGVRLTEG at 23/365 in AT5G47390.1
GESDQSLSLKLGGGSS at 330/365 in AT5G47390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os037028 ETVSTSLSLNLVGGQN in 293/318 AT5G47390.1 1st_1st 0.541818181 Ia
Os000774 GGGGVRLFGVRLTSP in 31/366 AT3G16350.1 not_not 0.401818181 III
SIEPSALSLQLTGPTN in 328/366
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47390.1     MTRRCSHCNHNGHNSRTCPNR-------GVKLFGVRLT---EGSIRKSASMGNLSHYT--
Os000774_Os01t0 MTRRCSHCSNNGHNARTCPARGGGGGGGGVRLFGVRLTSPPEVAMKKSASMSCIASSL-G
Os037028_Os10t0 MTRRCSHCSHNGHNSRTCPNR-------GVKIFGVRLT---DGSIRKSASMGNLSLLSSA
                ********.:****:**** *       **::******   : :::*****. ::     

AT5G47390.1     -GSGSGGHGTGSNTPGSPGDVPDH--VAGDGYASEDFVAGSSS-SR---ERKKGTPWTEE
Os000774_Os01t0 SGGGSGG-----SSPAGTGRGGGGGGEGAAGYASDDPTHASCS-TNGRGERKKGTPWTEE
Os037028_Os10t0 AGSTSGG--------ASPADGPDAAPTAADGYASDDFVQGSSSATR---DRKKGVPWTEE
                 *. ***        ....   .    .. ****:* . .*.* :.   :****.*****

AT5G47390.1     EHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMV
Os000774_Os01t0 EHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMV
Os037028_Os10t0 EHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRRSSLFDMV
                *** **:****************:*.:*****************:* :************

AT5G47390.1     PDEVGDIP---------------------------MDLQEPEEDNIPVETEMQGADSIHQ
Os000774_Os01t0 PEMPMDESPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEF---------------AR
Os037028_Os10t0 PDESMDLPP-------------------------LPGGQEPET----------------Q
                *:   * .                              :***                 :

AT5G47390.1     TLAPSSLHAPSILEIEECESMDSTNSTTGEPTATAAAASSSSRLEETTQLQSQLQPQPQL
Os000774_Os01t0 HLSDLQLR-----KHEESEFTEPS---------LAALDLEMN--------HAA-----PF
Os037028_Os10t0 VLNQPALPPPR--EEEEVDSMESD---------TSAVAESSS--------ASAIMPD-NL
                 *    *      : ** :  :.           :*   . .         :       :

AT5G47390.1     PGSFPILYPTYFSPYYPFPFPIWPAGYVPEPPKKEETHEILRPTAVHSKAPIN-VDELLG
Os000774_Os01t0 KTKFVLTMPTFYPALIPVPLTLWPPNVANVGE-SGTNHEILKPTPVNGKEVINKADEVVG
Os037028_Os10t0 QSTYPVIVPAYFSPFLQFSVPFWQNQKDEDGP-VQETHEIVKPVPVHSKSPIN-VDELVG
                  .: :  *:::..   ....:*             .***::*..*:.*  ** .**::*

AT5G47390.1     MSKLSLAESNKHGESDQSLSLKLGGGSSSRQSAFHPNPSSDSSDI----KSVIHAL
Os000774_Os01t0 MSKLTIGDGSSNSIEPSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNNSPIHAV
Os037028_Os10t0 MSKLSIGESNQETVS-TSLSLNLVGG-QNRQSAFHANPPTRAQA------------
                ****::.:....  .  :***:* *  ..****** **.  .
BoxShade v3.31 C (beta, 970507) Output
AT5G47390.1     M T R R C S H C N H N G H N S R T C P N R - - - - - - - G V K L F G V R L T - - - E G S I R K S A S M G N L S H Y T - -
Os000774_Os01t0    M T R R C S H C S N N G H N A R T C P A R G G G G G G G G V R L F G V R L T S P P E V A M K K S A S M S C I A S S L - G
Os037028_Os10t0    M T R R C S H C S H N G H N S R T C P N R - - - - - - - G V K I F G V R L T - - - D G S I R K S A S M G N L S L L S S A
 
AT5G47390.1     - G S G S G G H G T G S N T P G S P G D V P D H - - V A G D G Y A S E D F V A G S S S - S R - - - E R K K G T P W T E E
Os000774_Os01t0    S G G G S G G - - - - - S S P A G T G R G G G G G G E G A A G Y A S D D P T H A S C S - T N G R G E R K K G T P W T E E
Os037028_Os10t0    A G S T S G G - - - - - - - - A S P A D G P D A A P T A A D G Y A S D D F V Q G S S S A T R - - - D R K K G V P W T E E
 
AT5G47390.1     E H R M F L L G L Q K L G K G D W R G I S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D M V
Os000774_Os01t0    E H R M F L M G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q T N S S R R K R R S S L F D M V
Os037028_Os10t0    E H R R F L L G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q S N M T R R K R R S S L F D M V
 
AT5G47390.1     P D E V G D I P - - - - - - - - - - - - - - - - - - - - - - - - - - - M D L Q E P E E D N I P V E T E M Q G A D S I H Q
Os000774_Os01t0    P E M P M D E S P V V V E Q L M L H S T Q D E A T S S N Q L P I S H L V K Q K E P E F - - - - - - - - - - - - - - - A R
Os037028_Os10t0    P D E S M D L P P - - - - - - - - - - - - - - - - - - - - - - - - - L P G G Q E P E T - - - - - - - - - - - - - - - - Q
 
AT5G47390.1     T L A P S S L H A P S I L E I E E C E S M D S T N S T T G E P T A T A A A A S S S S R L E E T T Q L Q S Q L Q P Q P Q L
Os000774_Os01t0    H L S D L Q L R - - - - - K H E E S E F T E P S - - - - - - - - - L A A L D L E M N - - - - - - - - H A A - - - - - P F
Os037028_Os10t0    V L N Q P A L P P P R - - E E E E V D S M E S D - - - - - - - - - T S A V A E S S S - - - - - - - - A S A I M P D - N L
 
AT5G47390.1     P G S F P I L Y P T Y F S P Y Y P F P F P I W P A G Y V P E P P K K E E T H E I L R P T A V H S K A P I N - V D E L L G
Os000774_Os01t0    K T K F V L T M P T F Y P A L I P V P L T L W P P N V A N V G E - S G T N H E I L K P T P V N G K E V I N K A D E V V G
Os037028_Os10t0    Q S T Y P V I V P A Y F S P F L Q F S V P F W Q N Q K D E D G P - V Q E T H E I V K P V P V H S K S P I N - V D E L V G
 
AT5G47390.1     M S K L S L A E S N K H G E S D Q S L S L K L G G G S S S R Q S A F H P N P S S D S S D I - - - - K S V I H A L
Os000774_Os01t0    M S K L T I G D G S S N S I E P S A L S L Q L T G P T N T R Q S A F H V N P P M A G P D L N K R N N S P I H A V
Os037028_Os10t0    M S K L S I G E S N Q E T V S - T S L S L N L V G G - Q N R Q S A F H A N P P T R A Q A - - - - - - - - - - - -
 
0