fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47390.1 PNRGVKLFGVRLTEG at 23/365 in AT5G47390.1
GESDQSLSLKLGGGSS at 330/365 in AT5G47390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021158 ETVSTSLSLNLLGGQN in 339/460 AT5G47390.1 1st_1st 0.529090909 Ia
NPGQKKLCLSLSLSLS in 381/460
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47390.1     --------------MTRRCSHCNHNGHNSRTCPNRGVKLFGVRLTEGS-IRKSASMGNLS
Sb021158_Sorbi1 LAAGGGGGGGGGGGMTRRCSHCSHNGHNSRTCPNRGVKIFGVRLTDGSAIRKSASMGNLS
                              ********.***************:******:** ***********

AT5G47390.1     HYT-GSGSGGHGTGSNTPGSPGDVPDHVAG--DGYASEDFVAGSSS-SRERKKGTPWTEE
Sb021158_Sorbi1 LLSAGSTSGG--------ASPADGPDLADGGAGGYASDDFVQGSSSASRERKKGVPWTEE
                  : ** ***        .**.* ** . *  .****:*** **** *******.*****

AT5G47390.1     EHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMV
Sb021158_Sorbi1 EHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDMV
                *** *******************:*.:*******************:*************

AT5G47390.1     PDEVGDIP--MDLQEPEEDNIPVETEMQGADSIHQTLAPSSLHAPSILEIEECESMDSTN
Sb021158_Sorbi1 PDESMDLPPLPGSQEPE------------TSVLNQAPLPPPVE-------EEVESMESDT
                ***  *:*   . ****            :. ::*:  *..:.       ** ***:* .

AT5G47390.1     STTGEPTATAAAASSSSRLEETTQLQSQLQPQPQLPGSFPILYPTYFSPYYPFPFPIWP-
Sb021158_Sorbi1 S------AVAESSTASALMPES------LQP------NYPMIVPAYFSPFLQFSVPFWPN
                *      *.* ::::*: : *:      ***      .:*:: *:****:  *..*:** 

AT5G47390.1     ---AGYVPEPPKKEETHEILRPTAVHSKAPINVDELLGMSKLSLAESNKHGESDQSLSLK
Sb021158_Sorbi1 QEDGGDLP-----QETHEIVKPVAVHSKNPINVDELVGMSKLSIGEPGQETVS-TSLSLN
                   .* :*     :*****::*.***** *******:******:.*..:.  *  ****:

AT5G47390.1     LGGGSSSRQSAFHPNPSSDSSDIKSVIHAL
Sb021158_Sorbi1 LLGG-QNRQSAFHANPQTRAQA--------
                * ** ..******.**.: :.
BoxShade v3.31 C (beta, 970507) Output
AT5G47390.1     - - - - - - - - - - - - - - M T R R C S H C N H N G H N S R T C P N R G V K L F G V R L T E G S - I R K S A S M G N L S
Sb021158_Sorbi1    L A A G G G G G G G G G G G M T R R C S H C S H N G H N S R T C P N R G V K I F G V R L T D G S A I R K S A S M G N L S
 
AT5G47390.1     H Y T - G S G S G G H G T G S N T P G S P G D V P D H V A G - - D G Y A S E D F V A G S S S - S R E R K K G T P W T E E
Sb021158_Sorbi1    L L S A G S T S G G - - - - - - - - A S P A D G P D L A D G G A G G Y A S D D F V Q G S S S A S R E R K K G V P W T E E
 
AT5G47390.1     E H R M F L L G L Q K L G K G D W R G I S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D M V
Sb021158_Sorbi1    E H R R F L L G L Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q S N M S R R K R R S S L F D M V
 
AT5G47390.1     P D E V G D I P - - M D L Q E P E E D N I P V E T E M Q G A D S I H Q T L A P S S L H A P S I L E I E E C E S M D S T N
Sb021158_Sorbi1    P D E S M D L P P L P G S Q E P E - - - - - - - - - - - - T S V L N Q A P L P P P V E - - - - - - - E E V E S M E S D T
 
AT5G47390.1     S T T G E P T A T A A A A S S S S R L E E T T Q L Q S Q L Q P Q P Q L P G S F P I L Y P T Y F S P Y Y P F P F P I W P -
Sb021158_Sorbi1    S - - - - - - A V A E S S T A S A L M P E S - - - - - - L Q P - - - - - - N Y P M I V P A Y F S P F L Q F S V P F W P N
 
AT5G47390.1     - - - A G Y V P E P P K K E E T H E I L R P T A V H S K A P I N V D E L L G M S K L S L A E S N K H G E S D Q S L S L K
Sb021158_Sorbi1    Q E D G G D L P - - - - - Q E T H E I V K P V A V H S K N P I N V D E L V G M S K L S I G E P G Q E T V S - T S L S L N
 
AT5G47390.1     L G G G S S S R Q S A F H P N P S S D S S D I K S V I H A L
Sb021158_Sorbi1    L L G G - Q N R Q S A F H A N P Q T R A Q A - - - - - - - -
 
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