fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47390.1 PNRGVKLFGVRLTEG at 23/365 in AT5G47390.1
GESDQSLSLKLGGGSS at 330/365 in AT5G47390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021158 ETVSTSLSLNLLGGQN in 339/460 AT5G47390.1 1st_1st 0.529090909 Ia
NPGQKKLCLSLSLSLS in 381/460
Sb024608 SGGGVRLFGVRLTTA in 73/407 AT3G16350.1 not_not 0.409090909 III
SMEPTALSLQLIGSTD in 369/407
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47390.1     --------------------------------------------------MTRRCSHCNH
Sb024608_Sorbi1 ----GKKREGEGGEQPRAHGVAFGTLAARRTYEPVASARVARTRASPPERMTRRCSHCSN
Sb021158_Sorbi1 LAAGGGGGGGGGG------------------------------------GMTRRCSHCSH
                                                                  ********.:

AT5G47390.1     NGHNSRTCPNR---GVKLFGVRLTEGS----IRKSASMGNLSHYT-GSGSGGHGTGSNTP
Sb024608_Sorbi1 NGHNSRTCPARSGGGVRLFGVRLTTAPAPAAMKKSASMSCIASSL-GGGSGG--------
Sb021158_Sorbi1 NGHNSRTCPNR---GVKIFGVRLTDGS---AIRKSASMGNLSLLSAGSTSGG--------
                ********* *   **::****** ..    ::*****. ::    *. ***        

AT5G47390.1     GSP-----GDVPDHVAG--DGYASEDFVAGSSS-SR----ERKKGTPWTEEEHRMFLLGL
Sb024608_Sorbi1 SSPPAGGVGGGRGGGDGG-AGYVSDD--PGHASCSTNGRVERKKGTPWTEEEHRMFLMGL
Sb021158_Sorbi1 ASP-----ADGPDLADGGAGGYASDDFVQGSSSASR----ERKKGVPWTEEEHRRFLLGL
                .**     ..  .   *   **.*:*   * :* *     *****.******** **:**

AT5G47390.1     QKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPDEVGDIP-
Sb024608_Sorbi1 QKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMV----AEMPV
Sb021158_Sorbi1 QKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDMVPDESMDLPP
                **************:*.:*****************:* *************     ::* 

AT5G47390.1     -MDLQEPEEDNIPVETEMQGADSIHQTLAPSSLHAPSILEIEECESMDSTNSTTGEPTAT
Sb024608_Sorbi1 DESLAAAE--QITIQNTQDEAASSNQL---PTLHLGHQKEAEFAKQMPTFQLRQHEESEY
Sb021158_Sorbi1 LPGSQEPE------------TSVLNQAPLPPPVE-------EEVESMESDTS------AV
                  .   .*            :   :*    ..:.       *  :.* :           

AT5G47390.1     AAAASSSSRLEETTQLQSQLQPQPQLPGSFPILYPTYFSPYYPFPFPIWP--------AG
Sb024608_Sorbi1 AEPSLTLPDLEMNSSVPFNTIAVPTMPAFYPALVPV--------PLTLWPPSVAHVEDAG
Sb021158_Sorbi1 AESSTASALMPES------LQP------NYPMIVPAYFSPFLQFSVPFWPNQ----EDGG
                * .: : . :  .        .       :* : *.        ...:**        .*

AT5G47390.1     YVPEPPKKEETHEILRPTAVHSKAPINVDELLGMSKLSLAESNKHGESDQSLSLKLGGGS
Sb024608_Sorbi1 ---------TTHEILKPTPLNGKEVIKADDVVGMSKLSIGEASSGSMEPTALSLQLIGST
Sb021158_Sorbi1 DLP-----QETHEIVKPVAVHSKNPINVDELVGMSKLSIGEPGQETVS-TSLSLNLLGG-
                          ****::*..::.*  *:.*:::******:.*...   .  :***:* *. 

AT5G47390.1     SSRQSAFHPNPSSDSSDI----KSVIHAL
Sb024608_Sorbi1 DTRQSAFHVSPPMNRPELSKRNSSPIHAV
Sb021158_Sorbi1 QNRQSAFHANPQTRAQA------------
                ..****** .*
BoxShade v3.31 C (beta, 970507) Output
AT5G47390.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T R R C S H C N H
Sb024608_Sorbi1    - - - - G K K R E G E G G E Q P R A H G V A F G T L A A R R T Y E P V A S A R V A R T R A S P P E R M T R R C S H C S N
Sb021158_Sorbi1    L A A G G G G G G G G G G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G M T R R C S H C S H
 
AT5G47390.1     N G H N S R T C P N R - - - G V K L F G V R L T E G S - - - - I R K S A S M G N L S H Y T - G S G S G G H G T G S N T P
Sb024608_Sorbi1    N G H N S R T C P A R S G G G V R L F G V R L T T A P A P A A M K K S A S M S C I A S S L - G G G S G G - - - - - - - -
Sb021158_Sorbi1    N G H N S R T C P N R - - - G V K I F G V R L T D G S - - - A I R K S A S M G N L S L L S A G S T S G G - - - - - - - -
 
AT5G47390.1     G S P - - - - - G D V P D H V A G - - D G Y A S E D F V A G S S S - S R - - - - E R K K G T P W T E E E H R M F L L G L
Sb024608_Sorbi1    S S P P A G G V G G G R G G G D G G - A G Y V S D D - - P G H A S C S T N G R V E R K K G T P W T E E E H R M F L M G L
Sb021158_Sorbi1    A S P - - - - - A D G P D L A D G G A G G Y A S D D F V Q G S S S A S R - - - - E R K K G V P W T E E E H R R F L L G L
 
AT5G47390.1     Q K L G K G D W R G I S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D M V P D E V G D I P -
Sb024608_Sorbi1    Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q T N S S R R K R R S S L F D M V - - - - A E M P V
Sb021158_Sorbi1    Q K L G K G D W R G I S R N F V V S R T P T Q V A S H A Q K Y F I R Q S N M S R R K R R S S L F D M V P D E S M D L P P
 
AT5G47390.1     - M D L Q E P E E D N I P V E T E M Q G A D S I H Q T L A P S S L H A P S I L E I E E C E S M D S T N S T T G E P T A T
Sb024608_Sorbi1    D E S L A A A E - - Q I T I Q N T Q D E A A S S N Q L - - - P T L H L G H Q K E A E F A K Q M P T F Q L R Q H E E S E Y
Sb021158_Sorbi1    L P G S Q E P E - - - - - - - - - - - - T S V L N Q A P L P P P V E - - - - - - - E E V E S M E S D T S - - - - - - A V
 
AT5G47390.1     A A A A S S S S R L E E T T Q L Q S Q L Q P Q P Q L P G S F P I L Y P T Y F S P Y Y P F P F P I W P - - - - - - - - A G
Sb024608_Sorbi1    A E P S L T L P D L E M N S S V P F N T I A V P T M P A F Y P A L V P V - - - - - - - - P L T L W P P S V A H V E D A G
Sb021158_Sorbi1    A E S S T A S A L M P E S - - - - - - L Q P - - - - - - N Y P M I V P A Y F S P F L Q F S V P F W P N Q - - - - E D G G
 
AT5G47390.1     Y V P E P P K K E E T H E I L R P T A V H S K A P I N V D E L L G M S K L S L A E S N K H G E S D Q S L S L K L G G G S
Sb024608_Sorbi1    - - - - - - - - - T T H E I L K P T P L N G K E V I K A D D V V G M S K L S I G E A S S G S M E P T A L S L Q L I G S T
Sb021158_Sorbi1    D L P - - - - - Q E T H E I V K P V A V H S K N P I N V D E L V G M S K L S I G E P G Q E T V S - T S L S L N L L G G -
 
AT5G47390.1     S S R Q S A F H P N P S S D S S D I - - - - K S V I H A L
Sb024608_Sorbi1    D T R Q S A F H V S P P M N R P E L S K R N S S P I H A V
Sb021158_Sorbi1    Q N R Q S A F H A N P Q T R A Q A - - - - - - - - - - - -
 
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