fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47390.1 PNRGVKLFGVRLTEG at 23/365 in AT5G47390.1
GESDQSLSLKLGGGSS at 330/365 in AT5G47390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047088 PNRGVKLFGVRLTDG in 24/333 AT5G47390.1 not_1st 0.607272727 II
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CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47390.1     MTRRCSHCNHNGHNSRTCPNRGVKLFGVRLTEGSIRKSASMGNLSHYTGSGSGGHGTGSN
gm047088_Glyma1 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAGSGSGPLHTGLN
                ********.**********************:************:**:*****   ** *

AT5G47390.1     TPGSPGDVPDHVA--GDGYASEDFVAG-SSSSRERKKGTPWTEEEHRMFLLGLQKLGKGD
gm047088_Glyma1 NPGSPGETPDHAAAVADGYLSEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGD
                .*****:.***.*  .*** *****.* **********.*********************

AT5G47390.1     WRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPDEVGDIPMDLQE-PE
gm047088_Glyma1 WRGIARTYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADTAMVQQDFLS
                ****:*.** :*******************************:*.**..* .*  *:  .

AT5G47390.1     EDNIPVETEMQGADSIHQTLAPSSLHAPSILEIEECESMDSTNSTTGEPTATAAAASSSS
gm047088_Glyma1 ANQLPTETE-----------GNNPLPAPPPLD-EECESMDSTNSNDGEPAPSKP------
                 :::*.***           . ..* **. *: ***********. ***:.: .      

AT5G47390.1     RLEETTQLQSQLQPQPQLPGSFPILYPTYFSPYYPFPFPIWPAGYVPEPPKKEETHEILR
gm047088_Glyma1 ---ENTQ------------SSYPMLYPAYYSPVFPFPLPYW-SGYSPESTKKEETHEVLK
                   *.**            .*:*:***:*:** :***:* * :** **..*******:*:

AT5G47390.1     PTAVHSKAPINVDELLGMSKLSLAES-NKHGESDQSLSLKLGGGSSSRQSAFHPNPSSDS
gm047088_Glyma1 PTAVHSKSPINVDELVGISKLSLGESIGDSGPS--SLSRKLIEEGPSRQSAFHATPTCGS
                *******:*******:*:*****.** .. * *  *** **   ..*******..*:..*

AT5G47390.1     SDIKSVIHAL
gm047088_Glyma1 SN-GSAIHAV
                *:  *.***:
BoxShade v3.31 C (beta, 970507) Output
AT5G47390.1     M T R R C S H C N H N G H N S R T C P N R G V K L F G V R L T E G S I R K S A S M G N L S H Y T G S G S G G H G T G S N
gm047088_Glyma1    M T R R C S H C S H N G H N S R T C P N R G V K L F G V R L T D G S I R K S A S M G N L T H Y A G S G S G P L H T G L N
 
AT5G47390.1     T P G S P G D V P D H V A - - G D G Y A S E D F V A G - S S S S R E R K K G T P W T E E E H R M F L L G L Q K L G K G D
gm047088_Glyma1    N P G S P G E T P D H A A A V A D G Y L S E D F V P G S S S S S R E R K K G V P W T E E E H R M F L L G L Q K L G K G D
 
AT5G47390.1     W R G I S R N Y V T T R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D M V P D E V G D I P M D L Q E - P E
gm047088_Glyma1    W R G I A R T Y V I S R T P T Q V A S H A Q K Y F I R Q S N V S R R K R R S S L F D I V A D E A A D T A M V Q Q D F L S
 
AT5G47390.1     E D N I P V E T E M Q G A D S I H Q T L A P S S L H A P S I L E I E E C E S M D S T N S T T G E P T A T A A A A S S S S
gm047088_Glyma1    A N Q L P T E T E - - - - - - - - - - - G N N P L P A P P P L D - E E C E S M D S T N S N D G E P A P S K P - - - - - -
 
AT5G47390.1     R L E E T T Q L Q S Q L Q P Q P Q L P G S F P I L Y P T Y F S P Y Y P F P F P I W P A G Y V P E P P K K E E T H E I L R
gm047088_Glyma1    - - - E N T Q - - - - - - - - - - - - S S Y P M L Y P A Y Y S P V F P F P L P Y W - S G Y S P E S T K K E E T H E V L K
 
AT5G47390.1     P T A V H S K A P I N V D E L L G M S K L S L A E S - N K H G E S D Q S L S L K L G G G S S S R Q S A F H P N P S S D S
gm047088_Glyma1    P T A V H S K S P I N V D E L V G I S K L S L G E S I G D S G P S - - S L S R K L I E E G P S R Q S A F H A T P T C G S
 
AT5G47390.1     S D I K S V I H A L
gm047088_Glyma1    S N - G S A I H A V
 
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