fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005596 not found in 165aa AT5G47640.1 1st_1st 0.804979253 Ia
Sm018351 not found in 115aa AT5G47640.1 1st_1st 0.759336099 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47640.1     MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ
Sm018351_Selmo1 --------GGGGN------LSSLSPREQDRFLPIANVSRIMKRGLPGNAKISKDAKETVQ
gm005596_Glyma0 MAESDNDSGGAQNAGNSGNLSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQ
                        **. *       *.********************:.**.***********:*

AT5G47640.1     ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE
Sm018351_Selmo1 ECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLRVYLHKYREQEGE
gm005596_Glyma0 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREMEGE
                *********:*********:***************:*****:*****::**:::** ***

AT5G47640.1     RTGLGRPQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQQNHMYGATGGGSDSG
Sm018351_Selmo1 KAMLAK---AGE------------------------------------------------
gm005596_Glyma0 KTVAAR--------DSSKDS----------ASASSYH--------QGHVYGSPAYHHQVP
                ::  .:                                                      

AT5G47640.1     GGA--ASGRTRT
Sm018351_Selmo1 ------------
gm005596_Glyma0 GPTYPAPGRPR-
BoxShade v3.31 C (beta, 970507) Output
AT5G47640.1     M G D S D R D S G G G Q N G N N Q N G Q S S L S P R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T M Q
Sm018351_Selmo1    - - - - - - - - G G G G N - - - - - - L S S L S P R E Q D R F L P I A N V S R I M K R G L P G N A K I S K D A K E T V Q
gm005596_Glyma0    M A E S D N D S G G A Q N A G N S G N L S E L S P R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V Q
 
AT5G47640.1     E C V S E F I S F V T G E A S D K C Q K E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q R F R E I E G E
Sm018351_Selmo1    E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E D Y V E P L R V Y L H K Y R E Q E G E
gm005596_Glyma0    E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E E Y V E P L K I Y L Q R F R E M E G E
 
AT5G47640.1     R T G L G R P Q T G G E V G E H Q R D A V G D G G G F Y G G G G G M Q Y H Q H H Q F L H Q Q N H M Y G A T G G G S D S G
Sm018351_Selmo1    K A M L A K - - - A G E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm005596_Glyma0    K T V A A R - - - - - - - - D S S K D S - - - - - - - - - - A S A S S Y H - - - - - - - - Q G H V Y G S P A Y H H Q V P
 
AT5G47640.1     G G A - - A S G R T R T
Sm018351_Selmo1    - - - - - - - - - - - -
gm005596_Glyma0    G P T Y P A P G R P R -
 
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