fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp009284 not found in 218aa AT4G14540.1 1st_not 0.780082987 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47640.1     MGD--------------SDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALP
pp009284_Pp1s30 MADSYGHNAGSPESSPHSDNESGG--HYRDQDA----SVREQDRFLPIANVSRIMKKALP
                *.*              **.:***  : .:*:.    * *********************

AT5G47640.1     ANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEP
pp009284_Pp1s30 SNAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEP
                :***********:**********:*********:***************:**********

AT5G47640.1     LKVYLQRFREIEGER--TGLGRPQTGGEVGEHQ-RDAVGDGGGFYGGGG-----------
pp009284_Pp1s30 LKVYLHKYRELEGEKASTAKGGDQQGGKEGSQGVMGSMGMSGGMNGMNGTMNGNMHGHGI
                *****:::**:***:  *. *  * **: *.:   .::* .**: * .*           

AT5G47640.1     -----------------GMQYHQHHQFLHQQNHMYGATGGGSDSGGGAASGRTRT
pp009284_Pp1s30 PVSMQMLQQSYGQQAPPGMMYSPHQMMPQYQMPM--------QSGGNQPRGV---
                                 ** *  *: : : *  *        :***. . *
BoxShade v3.31 C (beta, 970507) Output
AT5G47640.1     M G D - - - - - - - - - - - - - - S D R D S G G G Q N G N N Q N G Q S S L S P R E Q D R F L P I A N V S R I M K K A L P
pp009284_Pp1s30    M A D S Y G H N A G S P E S S P H S D N E S G G - - H Y R D Q D A - - - - S V R E Q D R F L P I A N V S R I M K K A L P
 
AT5G47640.1     A N A K I S K D A K E T M Q E C V S E F I S F V T G E A S D K C Q K E K R K T I N G D D L L W A M T T L G F E D Y V E P
pp009284_Pp1s30    S N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E D Y V E P
 
AT5G47640.1     L K V Y L Q R F R E I E G E R - - T G L G R P Q T G G E V G E H Q - R D A V G D G G G F Y G G G G - - - - - - - - - - -
pp009284_Pp1s30    L K V Y L H K Y R E L E G E K A S T A K G G D Q Q G G K E G S Q G V M G S M G M S G G M N G M N G T M N G N M H G H G I
 
AT5G47640.1     - - - - - - - - - - - - - - - - - G M Q Y H Q H H Q F L H Q Q N H M Y G A T G G G S D S G G G A A S G R T R T
pp009284_Pp1s30    P V S M Q M L Q Q S Y G Q Q A P P G M M Y S P H Q M M P Q Y Q M P M - - - - - - - - Q S G G N Q P R G V - - -
 
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