fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os013460 not found in 219aa AT4G14540.1 1st_not 0.780082987 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47640.1     MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ
Os013460_Os03t0 MPDSDNDSGG---PSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQ
                * ***.****    .*  * .  ***********************************:*

AT5G47640.1     ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE
Os013460_Os03t0 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGE
                *********:*********:************************:*** **::*******

AT5G47640.1     R-----TGLGR-------PQTGGEVGEHQRDAVGDGGGFY---GGGGGM-----------
Os013460_Os03t0 RAAASTTGAGTSAASTTPPQQ-----QHTANAAGGYAGYAAPGAGPGGMMMMMGQPMYGS
                *     ** *        **      :*  :*.*. .*:    .* ***           

AT5G47640.1     -------QYHQHHQFLHQQNHMYGATGGGSDSGGGAASGRTRT----
Os013460_Os03t0 PPPPPQQQQQQHHHMAMGGRGGFGHHPGGGGGGSSSSSGHGRQNRGA
                       * :***::    .  :*   **...*..::**: *
BoxShade v3.31 C (beta, 970507) Output
AT5G47640.1     M G D S D R D S G G G Q N G N N Q N G Q S S L S P R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T M Q
Os013460_Os03t0    M P D S D N D S G G - - - P S N Y A G G E L S S P R E Q D R F L P I A N V S R I M K K A L P A N A K I S K D A K E T V Q
 
AT5G47640.1     E C V S E F I S F V T G E A S D K C Q K E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q R F R E I E G E
Os013460_Os03t0    E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V D P L K H Y L H K F R E I E G E
 
AT5G47640.1     R - - - - - T G L G R - - - - - - - P Q T G G E V G E H Q R D A V G D G G G F Y - - - G G G G G M - - - - - - - - - - -
Os013460_Os03t0    R A A A S T T G A G T S A A S T T P P Q Q - - - - - Q H T A N A A G G Y A G Y A A P G A G P G G M M M M M G Q P M Y G S
 
AT5G47640.1     - - - - - - - Q Y H Q H H Q F L H Q Q N H M Y G A T G G G S D S G G G A A S G R T R T - - - -
Os013460_Os03t0    P P P P P Q Q Q Q Q Q H H H M A M G G R G G F G H H P G G G G G G S S S S S G H G R Q N R G A
 
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