fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024092 not found in 365aa AT4G14540.1 1st_not 0.796680497 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47640.1     ------------MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPAN
Sb024092_Sorbi1 LDRTTLVGGWAAMPDSDNESGGPSNADFS------SPREQDRFLPIANVSRIMKKALPAN
                            * ***.:*** .*.: .      *************************

AT5G47640.1     AKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLK
Sb024092_Sorbi1 AKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIEPLK
                **********:**********:*********:***********************:****

AT5G47640.1     VYLQRFREIEGERTGLGRPQTGGEVGEHQRDAV------GDGG-----GFYGGGGG----
Sb024092_Sorbi1 LYLHKFRELEGEKAATGVAGSSSGVSQPHRESTPSSAHNGAGGPVGGYGMYGGAGGGGSG
                :**::***:***::. * . :.. *.: :*::.      * **     *:***.**    

AT5G47640.1     --MQYHQ-----------------HHQFLHQQNHMYGATGGGSDSGGGAAS-----GRTR
Sb024092_Sorbi1 MIMMMGQPMYGGSPPAASGYPQPPHHQMV------MGGKGGAYGHGGGSSSSPSGLGRQD
                  *   *                 ***::       *..**. . ***::*     **  

AT5G47640.1     T-
Sb024092_Sorbi1 RL
BoxShade v3.31 C (beta, 970507) Output
AT5G47640.1     - - - - - - - - - - - - M G D S D R D S G G G Q N G N N Q N G Q S S L S P R E Q D R F L P I A N V S R I M K K A L P A N
Sb024092_Sorbi1    L D R T T L V G G W A A M P D S D N E S G G P S N A D F S - - - - - - S P R E Q D R F L P I A N V S R I M K K A L P A N
 
AT5G47640.1     A K I S K D A K E T M Q E C V S E F I S F V T G E A S D K C Q K E K R K T I N G D D L L W A M T T L G F E D Y V E P L K
Sb024092_Sorbi1    A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y I E P L K
 
AT5G47640.1     V Y L Q R F R E I E G E R T G L G R P Q T G G E V G E H Q R D A V - - - - - - G D G G - - - - - G F Y G G G G G - - - -
Sb024092_Sorbi1    L Y L H K F R E L E G E K A A T G V A G S S S G V S Q P H R E S T P S S A H N G A G G P V G G Y G M Y G G A G G G G S G
 
AT5G47640.1     - - M Q Y H Q - - - - - - - - - - - - - - - - - H H Q F L H Q Q N H M Y G A T G G G S D S G G G A A S - - - - - G R T R
Sb024092_Sorbi1    M I M M M G Q P M Y G G S P P A A S G Y P Q P P H H Q M V - - - - - - M G G K G G A Y G H G G G S S S S P S G L G R Q D
 
AT5G47640.1     T -
Sb024092_Sorbi1    R L
 
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