fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009649 not found in 254aa AT5G47670.1 1st_1st 0.420258620 Ia
Gm045576 not found in 226aa AT5G47670.1 1st_1st 0.484913793 Ia
Pt044860 not found in 231aa AT5G47670.1 1st_1st 0.467672413 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47670.1     MERGGFHGYRKLSVNNTTPSPPGLAANFLMAEGSMR--PPEFNQP--NK--TSNGGEEEC
gm045576_Glyma1 METGGFHGYRKLP--NTTA---GLKLS--VSDMNMRQQVASSDHS------AATGEENEC
pt044860_POPTR_ MDRGGFHGYRKHA--NTS------------SEINMR--LAEINHSTTNKFHTTTDDISEC
Os009649_Os02t0 MEAG----------------YPGTAANGAAADGNGGAQQAAAAPA---------------
                *: *                          :: .     .    .               

AT5G47670.1     TVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQR
gm045576_Glyma1 TVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQR
pt044860_POPTR_ TVREQDRFMPIANVIRIMRKMLPPHGKISDDAKETIQECVSEFISFITSEANERCQREQR
Os009649_Os02t0 -IREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEANERCQREQR
                 :*****:***********::**.*.*****:**********:*****.***********

AT5G47670.1     KTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGE-RGVSCSAGSVSMTNGL------
gm045576_Glyma1 KTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGD-RT--------SMRGEP------
pt044860_POPTR_ KTITAEDVLYAMSKLGFDDYIEPLTIYLHRYRELEGE-RG--------SMRGEP------
Os009649_Os02t0 KTITAEDVLWAMSRLGFDDYVEPLGVYLHRYREFEGESRGVGVGVG--AARGDHHHGHVG
                *********:***:******:*** :*******:**: *         :  .        

AT5G47670.1     -VVK----RPNGTMTEYG-----------AYGPVPGIHMAQYHY-------RHQNGF---
gm045576_Glyma1 -LGK--------RTVEYATL-----GVATAFVP-PPYH--------------HHNGY---
pt044860_POPTR_ -LMKTRNSNNNNNVDQYGTLM---AGAGAAYA--PAFHVSHHHH-------PHHHGF---
Os009649_Os02t0 GMLK---SRAQGSMVTHHDMQMHAAMYGGGAVP-PPPHPPPHHHAFHQLMPPHHGQYAPP
                 : *            :            .    *  *              *:  :   

AT5G47670.1     --VFSGNEPNSK-------------MSGSS---------SGASGARVEVFPTQQHKY---
gm045576_Glyma1 ---FGAAMPMGT------YVREAPPNTASSHHHHHHHHHHARGISNA-------HEPNAR
pt044860_POPTR_ ---FGGA-PIGAGY---MTMRDANSNASSS---------HSAALANVEAF--AQHQ----
Os009649_Os02t0 YDMYGGEHGMAAYYGGMYAPGSGGDGSGSS-------GSGGAGTPQTVNF-EHQHPFGYK
                   :..    .               :.**          . . ...       *     

AT5G47670.1     --
gm045576_Glyma1 SI
pt044860_POPTR_ --
Os009649_Os02t0 --
BoxShade v3.31 C (beta, 970507) Output
AT5G47670.1     M E R G G F H G Y R K L S V N N T T P S P P G L A A N F L M A E G S M R - - P P E F N Q P - - N K - - T S N G G E E E C
gm045576_Glyma1    M E T G G F H G Y R K L P - - N T T A - - - G L K L S - - V S D M N M R Q Q V A S S D H S - - - - - - A A T G E E N E C
pt044860_POPTR_    M D R G G F H G Y R K H A - - N T S - - - - - - - - - - - - S E I N M R - - L A E I N H S T T N K F H T T T D D I S E C
Os009649_Os02t0    M E A G - - - - - - - - - - - - - - - - Y P G T A A N G A A A D G N G G A Q Q A A A A P A - - - - - - - - - - - - - - -
 
AT5G47670.1     T V R E Q D R F M P I A N V I R I M R R I L P A H A K I S D D S K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R
gm045576_Glyma1    T V R E Q D R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R
pt044860_POPTR_    T V R E Q D R F M P I A N V I R I M R K M L P P H G K I S D D A K E T I Q E C V S E F I S F I T S E A N E R C Q R E Q R
Os009649_Os02t0    - I R E Q D R L M P I A N V I R I M R R V L P A H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R
 
AT5G47670.1     K T I T A E D V L W A M S K L G F D D Y I E P L T L Y L H R Y R E L E G E - R G V S C S A G S V S M T N G L - - - - - -
gm045576_Glyma1    K T I T A E D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D - R T - - - - - - - - S M R G E P - - - - - -
pt044860_POPTR_    K T I T A E D V L Y A M S K L G F D D Y I E P L T I Y L H R Y R E L E G E - R G - - - - - - - - S M R G E P - - - - - -
Os009649_Os02t0    K T I T A E D V L W A M S R L G F D D Y V E P L G V Y L H R Y R E F E G E S R G V G V G V G - - A A R G D H H H G H V G
 
AT5G47670.1     - V V K - - - - R P N G T M T E Y G - - - - - - - - - - - A Y G P V P G I H M A Q Y H Y - - - - - - - R H Q N G F - - -
gm045576_Glyma1    - L G K - - - - - - - - R T V E Y A T L - - - - - G V A T A F V P - P P Y H - - - - - - - - - - - - - - H H N G Y - - -
pt044860_POPTR_    - L M K T R N S N N N N N V D Q Y G T L M - - - A G A G A A Y A - - P A F H V S H H H H - - - - - - - P H H H G F - - -
Os009649_Os02t0    G M L K - - - S R A Q G S M V T H H D M Q M H A A M Y G G G A V P - P P P H P P P H H H A F H Q L M P P H H G Q Y A P P
 
AT5G47670.1     - - V F S G N E P N S K - - - - - - - - - - - - - M S G S S - - - - - - - - - S G A S G A R V E V F P T Q Q H K Y - - -
gm045576_Glyma1    - - - F G A A M P M G T - - - - - - Y V R E A P P N T A S S H H H H H H H H H H A R G I S N A - - - - - - - H E P N A R
pt044860_POPTR_    - - - F G G A - P I G A G Y - - - M T M R D A N S N A S S S - - - - - - - - - H S A A L A N V E A F - - A Q H Q - - - -
Os009649_Os02t0    Y D M Y G G E H G M A A Y Y G G M Y A P G S G G D G S G S S - - - - - - - G S G G A G T P Q T V N F - E H Q H P F G Y K
 
AT5G47670.1     - -
gm045576_Glyma1    S I
pt044860_POPTR_    - -
Os009649_Os02t0    - -
 
0