fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm020206 not found in 90aa AT5G47670.1 1st_1st 0.359913793 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47670.1     MERGGFHGYRKLSVNNTTPSPPGLAANFLMAEGSMRPPEFNQPNKTSNGGEEECTVREQD
Sm020206_Selmo1 --------------------------------------------------------REQD
                                                                        ****

AT5G47670.1     RFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAE
Sm020206_Selmo1 RFMPIANVIRIMRKVLPAHAKISDDAKETIQECVSEFISFITSEANDKCQREQRKTITAE
                *************::**********:**********:*****.***::************

AT5G47670.1     DVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVKRPNGTMTEYG
Sm020206_Selmo1 DLLWAMSKLGFDDYADPLSLFLHKYR----------------------------------
                *:************ :**:*:**:**                                  

AT5G47670.1     AYGPVPGIHMAQYHYRHQNGFVFSGNEPNSKMSGSSSGASGARVEVFPTQQHKY
Sm020206_Selmo1 ------------------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT5G47670.1     M E R G G F H G Y R K L S V N N T T P S P P G L A A N F L M A E G S M R P P E F N Q P N K T S N G G E E E C T V R E Q D
Sm020206_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R E Q D
 
AT5G47670.1     R F M P I A N V I R I M R R I L P A H A K I S D D S K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T I T A E
Sm020206_Selmo1    R F M P I A N V I R I M R K V L P A H A K I S D D A K E T I Q E C V S E F I S F I T S E A N D K C Q R E Q R K T I T A E
 
AT5G47670.1     D V L W A M S K L G F D D Y I E P L T L Y L H R Y R E L E G E R G V S C S A G S V S M T N G L V V K R P N G T M T E Y G
Sm020206_Selmo1    D L L W A M S K L G F D D Y A D P L S L F L H K Y R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G47670.1     A Y G P V P G I H M A Q Y H Y R H Q N G F V F S G N E P N S K M S G S S S G A S G A R V E V F P T Q Q H K Y
Sm020206_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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