fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010924 not found in 276aa AT5G47670.2 1st_not 0.400862068 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47670.1     MERGGFHGYRKLSVNNTTPSPPGLAANFLMAEGSMRPPEFNQPNKTSNGGEEECT----V
Sb010924_Sorbi1 --------------MDSSFLPAGAESGSVVSGGA------------NNGAAAQQQAPPLI
                               :::  *.*  :. ::: *:            .**.  :      :

AT5G47670.1     REQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKT
Sb010924_Sorbi1 REQDRLMPIANVIRIMRRVLPAHAKISDDAQETIQECVSEYISFITGEANERCQREQRKT
                *****:************:**********::*****************************

AT5G47670.1     ITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGE-RGVSCSAGSVSMTNG-------LV
Sb010924_Sorbi1 ITAEDVLWAMSRLGFDDYVEPLSVYLHRYRDFQGEARGVRLAPGAAPSRGGDHHHHHPLK
                ***********:******:***::******:::** ***  :.*:..  .*       * 

AT5G47670.1     VKRPNG--------------TMTEYGA-YG----PVPGIHMAQYHYRHQNGFVF----SG
Sb010924_Sorbi1 SRGPGGGSGAAMLPHHHHHHDMQMHAAMYGGTVPPAPG----PPHHGHGHGFLMPHPQGG
                 : *.*               *  :.* **    *.**      *: * :**::    .*

AT5G47670.1     N-------EP---------------------NSKMSGSSSGASGARVEVFPT------QQ
Sb010924_Sorbi1 SHYLPYPYEPTYGGEHAMAAYYGGAAAYAPGNGGGSGDGSGSSGGSASHTPQGSGGFEHP
                .       **                     *.  **..**:**. ..  *       : 

AT5G47670.1     HKY---
Sb010924_Sorbi1 HPFAYK
                * :
BoxShade v3.31 C (beta, 970507) Output
AT5G47670.1     M E R G G F H G Y R K L S V N N T T P S P P G L A A N F L M A E G S M R P P E F N Q P N K T S N G G E E E C T - - - - V
Sb010924_Sorbi1    - - - - - - - - - - - - - - M D S S F L P A G A E S G S V V S G G A - - - - - - - - - - - - N N G A A A Q Q Q A P P L I
 
AT5G47670.1     R E Q D R F M P I A N V I R I M R R I L P A H A K I S D D S K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T
Sb010924_Sorbi1    R E Q D R L M P I A N V I R I M R R V L P A H A K I S D D A Q E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T
 
AT5G47670.1     I T A E D V L W A M S K L G F D D Y I E P L T L Y L H R Y R E L E G E - R G V S C S A G S V S M T N G - - - - - - - L V
Sb010924_Sorbi1    I T A E D V L W A M S R L G F D D Y V E P L S V Y L H R Y R D F Q G E A R G V R L A P G A A P S R G G D H H H H H P L K
 
AT5G47670.1     V K R P N G - - - - - - - - - - - - - - T M T E Y G A - Y G - - - - P V P G I H M A Q Y H Y R H Q N G F V F - - - - S G
Sb010924_Sorbi1    S R G P G G G S G A A M L P H H H H H H D M Q M H A A M Y G G T V P P A P G - - - - P P H H G H G H G F L M P H P Q G G
 
AT5G47670.1     N - - - - - - - E P - - - - - - - - - - - - - - - - - - - - - N S K M S G S S S G A S G A R V E V F P T - - - - - - Q Q
Sb010924_Sorbi1    S H Y L P Y P Y E P T Y G G E H A M A A Y Y G G A A A Y A P G N G G G S G D G S G S S G G S A S H T P Q G S G G F E H P
 
AT5G47670.1     H K Y - - -
Sb010924_Sorbi1    H P F A Y K
 
0