fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045576 not found in 226aa AT5G47670.1 1st_1st 0.484913793 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47670.1     MERGGFHGYRKLSVNNTTPSPPGLAANFLMAEGSMRPPEFNQPNKTSNGGEEECTVREQD
gm045576_Glyma1 METGGFHGYRKLP--NTT---AGLKLS--VSDMNMRQQVASSDHSAATGEENECTVREQD
                ** *********.  ***   .**  .  ::: .**    .. :.::.* *:********

AT5G47670.1     RFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAE
gm045576_Glyma1 RFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAE
                *************:***.*******:**********************************

AT5G47670.1     DVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVKR---------
gm045576_Glyma1 DVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR--------TSMRGEPLGKRTVEYATLGV
                *******************:**********:*        .** .  : **         

AT5G47670.1     --------------------PNGTMTEYGAYGPVPGIHMAQYHYRHQNGFVFSGNEPNSK
gm045576_Glyma1 ATAFVPPPYHHHNGYFGAAMPMGTYVREAPPNTASSHHHHHHHHHHARG-ISNAHEPNAR
                                    * ** .. .. ..... *  ::*::* .* : ..:***::

AT5G47670.1     MSGSSSGASGARVEVFPTQQHKY
gm045576_Glyma1 SI---------------------
BoxShade v3.31 C (beta, 970507) Output
AT5G47670.1     M E R G G F H G Y R K L S V N N T T P S P P G L A A N F L M A E G S M R P P E F N Q P N K T S N G G E E E C T V R E Q D
gm045576_Glyma1    M E T G G F H G Y R K L P - - N T T - - - A G L K L S - - V S D M N M R Q Q V A S S D H S A A T G E E N E C T V R E Q D
 
AT5G47670.1     R F M P I A N V I R I M R R I L P A H A K I S D D S K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T I T A E
gm045576_Glyma1    R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T I T A E
 
AT5G47670.1     D V L W A M S K L G F D D Y I E P L T L Y L H R Y R E L E G E R G V S C S A G S V S M T N G L V V K R - - - - - - - - -
gm045576_Glyma1    D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D R - - - - - - - - T S M R G E P L G K R T V E Y A T L G V
 
AT5G47670.1     - - - - - - - - - - - - - - - - - - - - P N G T M T E Y G A Y G P V P G I H M A Q Y H Y R H Q N G F V F S G N E P N S K
gm045576_Glyma1    A T A F V P P P Y H H H N G Y F G A A M P M G T Y V R E A P P N T A S S H H H H H H H H H H A R G - I S N A H E P N A R
 
AT5G47670.1     M S G S S S G A S G A R V E V F P T Q Q H K Y
gm045576_Glyma1    S I - - - - - - - - - - - - - - - - - - - - -
 
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