fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045576 not found in 226aa AT5G47670.1 1st_1st 0.484913793 Ia
Gm019625 not found in 223aa AT5G47670.1 not_1st 0.482758620 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G47670.1     MERGGFHGYRKLSVNNTTPSPPGLAANFLMAEGSMRPPEFNQPNKTSN----------GG
gm019625_Glyma0 METGGFHGYRKL---------PNTTSGLKLSVSDMNMNMRQQQVASSDQNCSNHSAA-GE
gm045576_Glyma1 METGGFHGYRKL---------PNTTAGLKLSVSDMNM---RQQVASSD-----HSAATGE
                ** *********         *. ::.: :: ..*.    .*   :*:          * 

AT5G47670.1     EEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQ
gm019625_Glyma0 ENECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQ
gm045576_Glyma1 ENECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQ
                *:*********************:***.*******:************************

AT5G47670.1     REQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAGSVSMTNGLVVK
gm019625_Glyma0 REQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR--------TSMRGEPLGK
gm045576_Glyma1 REQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDR--------TSMRGEPLGK
                *****************************:**********:*        .** .  : *

AT5G47670.1     RPNGTMTEYG------AYGPVPGIHMAQYHYRHQNGFVFSG---------NEPNSKMSGS
gm019625_Glyma0 R----TVEYATL--ATAFVPPP--------FHHHNGYFGAAMPMGTYVRETPPNAASSHH
gm045576_Glyma1 R----TVEYATLGVATAFVPPP--------YHHHNGYFGAAMPMGTYVREAPPNTASSHH
                *     .**.      *: * *        ::*:**:. :.           **:  *  

AT5G47670.1     SS--------GASGARVEVFPTQQHKY
gm019625_Glyma0 HH--------GISNAHE---PNARSI-
gm045576_Glyma1 HHHHHHHHARGISNAHE---PNARSI-
                          * *.*:    *. :
BoxShade v3.31 C (beta, 970507) Output
AT5G47670.1     M E R G G F H G Y R K L S V N N T T P S P P G L A A N F L M A E G S M R P P E F N Q P N K T S N - - - - - - - - - - G G
gm019625_Glyma0    M E T G G F H G Y R K L - - - - - - - - - P N T T S G L K L S V S D M N M N M R Q Q Q V A S S D Q N C S N H S A A - G E
gm045576_Glyma1    M E T G G F H G Y R K L - - - - - - - - - P N T T A G L K L S V S D M N M - - - R Q Q V A S S D - - - - - H S A A T G E
 
AT5G47670.1     E E E C T V R E Q D R F M P I A N V I R I M R R I L P A H A K I S D D S K E T I Q E C V S E Y I S F I T G E A N E R C Q
gm019625_Glyma0    E N E C T V R E Q D R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q
gm045576_Glyma1    E N E C T V R E Q D R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q
 
AT5G47670.1     R E Q R K T I T A E D V L W A M S K L G F D D Y I E P L T L Y L H R Y R E L E G E R G V S C S A G S V S M T N G L V V K
gm019625_Glyma0    R E Q R K T I T A E D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D R - - - - - - - - T S M R G E P L G K
gm045576_Glyma1    R E Q R K T I T A E D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D R - - - - - - - - T S M R G E P L G K
 
AT5G47670.1     R P N G T M T E Y G - - - - - - A Y G P V P G I H M A Q Y H Y R H Q N G F V F S G - - - - - - - - - N E P N S K M S G S
gm019625_Glyma0    R - - - - T V E Y A T L - - A T A F V P P P - - - - - - - - F H H H N G Y F G A A M P M G T Y V R E T P P N A A S S H H
gm045576_Glyma1    R - - - - T V E Y A T L G V A T A F V P P P - - - - - - - - Y H H H N G Y F G A A M P M G T Y V R E A P P N T A S S H H
 
AT5G47670.1     S S - - - - - - - - G A S G A R V E V F P T Q Q H K Y
gm019625_Glyma0    H H - - - - - - - - G I S N A H E - - - P N A R S I -
gm045576_Glyma1    H H H H H H H H A R G I S N A H E - - - P N A R S I -
 
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