fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G47790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041956 not found in 425aa AT5G47790.1 1st_1st 0.611347517 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G47790.1     MYGR--SGLDRFKKSQTSEPFSVSANP-------------------PPVV-------QQH
gm041956_Glyma1 MYGRASSGLDRFKKAQSLEPFSVSVNSSSRNGAQPSTKVVDPSSALPPLSQASANQPQQH
                ****  ********:*: ******.*.                   **:        ***

AT5G47790.1     LSPEAL----------SGQKTQIGAGQSNWHPPDWAIEPRAGVYSLEVVKDGQILDRIHL
gm041956_Glyma1 ASQKTVGVEAAPLLGQNQQATQVGGGQSTWQPPDWAIEPRPGVFYLEVLKDGQVLDQINL
                 * :::          . * **:*.***.*:*********.**: ***:****:**:*:*

AT5G47790.1     DRRRHIFGRQHQTCDFVLDHQSVSRQHAAVVPHKNGSIFVIDLGSAHGTFVANERLTKDT
gm041956_Glyma1 DRRRNIFGRQIQTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTKDS
                ****:***** *******************:*******:********************:

AT5G47790.1     PVELEVGQSLRFAASTRIYLLRKNSEALFSRPPPPAEIKLPPPPDASDEEAVVAYNTLLN
gm041956_Glyma1 PVELEVGQSLRFAASTRAYILRKNDAALFPRPPPPTEINFPPPPDPSDEEAVVAYNTLLN
                ***************** *:****. ***.*****:**::*****.**************

AT5G47790.1     RYGLSN-------GESGGMLGKRKEKTGSEAGVAKRMKKVRVSFRDQLGGELAEIVGMSD
gm041956_Glyma1 RYGINKADLVSKPGESGSSVSGKNKDYQSERP-AKRIRKTRVAFRDQVGGELVEVVGISD
                ***:.:       ****. :. :::.  **   ***::*.**:****:****.*:**:**

AT5G47790.1     GADVETEPGPINVKEGSLVGKYESLVRVTLIPKGKVKEEKAFTGGTRGGVTDRLQEAMNM
gm041956_Glyma1 GADVETEPGPVGVKEGSLVGKYESLVQITVIPKGKEQSSVKEADSSPKGVTDKLQEVLKK
                **********:.**************::*:***** :..   :..:  ****:***.:: 

AT5G47790.1     LKRGPKTGIYDDLYGGDSLAKAVGTSWA-----SVSQPAAETECG-GVGEED--------
gm041956_Glyma1 IKTPVKTGIYDDLY-GESLSVKVGSSWAYSPALGTGERAPDKEDGAGSGKSESNPNAVDG
                :*   ********* *:**:  **:***     ...: *.:.* * * *:.:        

AT5G47790.1     DNDDLFGD
gm041956_Glyma1 DDDDLFG-
                *:*****
BoxShade v3.31 C (beta, 970507) Output
AT5G47790.1     M Y G R - - S G L D R F K K S Q T S E P F S V S A N P - - - - - - - - - - - - - - - - - - - P P V V - - - - - - - Q Q H
gm041956_Glyma1    M Y G R A S S G L D R F K K A Q S L E P F S V S V N S S S R N G A Q P S T K V V D P S S A L P P L S Q A S A N Q P Q Q H
 
AT5G47790.1     L S P E A L - - - - - - - - - - S G Q K T Q I G A G Q S N W H P P D W A I E P R A G V Y S L E V V K D G Q I L D R I H L
gm041956_Glyma1    A S Q K T V G V E A A P L L G Q N Q Q A T Q V G G G Q S T W Q P P D W A I E P R P G V F Y L E V L K D G Q V L D Q I N L
 
AT5G47790.1     D R R R H I F G R Q H Q T C D F V L D H Q S V S R Q H A A V V P H K N G S I F V I D L G S A H G T F V A N E R L T K D T
gm041956_Glyma1    D R R R N I F G R Q I Q T C D F V L D H Q S V S R Q H A A V I P H K N G S I Y V I D L G S A H G T F V A N E R L T K D S
 
AT5G47790.1     P V E L E V G Q S L R F A A S T R I Y L L R K N S E A L F S R P P P P A E I K L P P P P D A S D E E A V V A Y N T L L N
gm041956_Glyma1    P V E L E V G Q S L R F A A S T R A Y I L R K N D A A L F P R P P P P T E I N F P P P P D P S D E E A V V A Y N T L L N
 
AT5G47790.1     R Y G L S N - - - - - - - G E S G G M L G K R K E K T G S E A G V A K R M K K V R V S F R D Q L G G E L A E I V G M S D
gm041956_Glyma1    R Y G I N K A D L V S K P G E S G S S V S G K N K D Y Q S E R P - A K R I R K T R V A F R D Q V G G E L V E V V G I S D
 
AT5G47790.1     G A D V E T E P G P I N V K E G S L V G K Y E S L V R V T L I P K G K V K E E K A F T G G T R G G V T D R L Q E A M N M
gm041956_Glyma1    G A D V E T E P G P V G V K E G S L V G K Y E S L V Q I T V I P K G K E Q S S V K E A D S S P K G V T D K L Q E V L K K
 
AT5G47790.1     L K R G P K T G I Y D D L Y G G D S L A K A V G T S W A - - - - - S V S Q P A A E T E C G - G V G E E D - - - - - - - -
gm041956_Glyma1    I K T P V K T G I Y D D L Y - G E S L S V K V G S S W A Y S P A L G T G E R A P D K E D G A G S G K S E S N P N A V D G
 
AT5G47790.1     D N D D L F G D
gm041956_Glyma1    D D D D L F G -
 
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