fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003468 not found in 406aa AT5G48250.1 1st_1st 0.442176870 Ia
Gm004777 not found in 405aa AT5G48250.1 1st_1st 0.531972789 Ia
Pt017260 not found in 379aa AT5G48250.1 1st_1st 0.546938775 Ia
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G48250.1     MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC
Sb003468_Sorbi1 MGALCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCASQPAMVRC
pt017260_POPTR_ MGYVCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSQPALVRC
gm004777_Glyma0 MGYLCDFCGDQRSLVYCRSDSACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAFVRS
                ** :*****:***:******:*.****************:**:***:*:** :*** **.

AT5G48250.1     SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE
Sb003468_Sorbi1 LAENASLCQNCDWNGHI--AGSSAAGHKRQTINCYSGCPSSAELSRIWSFVSD--IPNVA
pt017260_POPTR_ AEERISLCQNCDWIGHG--TSTSASTHRRQTINSYSGCPSASELSSIWSFVLD--FPSRG
gm004777_Glyma0 VEEKISLCQNCDWLGHG--TSPSSSMHKRQSINCYSGCPSAAEFSSIWSFFLD--IPSLG
                  *. ******** **    ..::: *:**:**.******::*:* ****  *  :..  

AT5G48250.1     -ESACEQGMGLMTIDEDGT-----------GEK-----SGVQKINVEQ------------
Sb003468_Sorbi1 PEPNCEQGISMMSISDSGVS----SQDNAAGDNNLLDIASETLISDLGTCDKP--LVGSS
pt017260_POPTR_ -ESTCEQELGLMSIAENSTTDSWGPTENTIGQN----ASGVVEVNDRREIAKSGVWLGSS
gm004777_Glyma0 -EA-CEQELGLMSINENI------PPE---GQN----VSGSTEVTDLPSKGKS--WAGTP
                 *. *** :.:*:* :.             *::     :.   :.               

AT5G48250.1     --PETSSAAQGMDHSSVPENSSMAK--------ELGVCE-DDFNGNLISDEVDLALENYE
Sb003468_Sorbi1 SGAGVNLLPLATDQTAGSVDSPPDKVPYTP---DKDMFSKDSIYEDFCVDDVDLAFENYE
pt017260_POPTR_ SIPESSSVPNNLDQTTRSANTSLPK--------------------DFNMDEMDLSLENYE
gm004777_Glyma0 SIPESSSEPRILDQPPGPANECVPKL-YCPGKKASGICEDDDLYDDFIMDEVDLELENYE
                  .  .  .   *:.. . :    *                    ::  *::** :****

AT5G48250.1     ELFGSAFNSSRYLFEHGGIGSLFE-KDEA-------------HEGSMQ------QPALSN
Sb003468_Sorbi1 ELFGTSHIQTEQLFDDAGIDSYFEVKEAP--AGNST------EQSKLK------QPANSN
pt017260_POPTR_ ELFGVTLNNSEELLENGGIDSLFGTKDMS--------------------VVNAVQPASSN
gm004777_Glyma0 ELFGMALSHSEELFENGGINSLFEAKDMSASAGDSHCQGAVAAEGSSAGLVNPIQPACSN
                **** :   :. *::..**.* *  *: .                         *** **

AT5G48250.1     NASADSFMTC---RTEPIICYSSKPAHS--NISFSGITGESNAGDFQDCGASSMKQLSRE
Sb003468_Sorbi1 AVSADSGMSNPGVKGDSSVCIPLRQARSSLSLSFSGLTGESSAGDHQDCVVSSL-LLMGE
pt017260_POPTR_ AASADSMMSN---KTEPILCFTEKQGHS--SLSFSGLNVESSAADYQDCGASSM-LLMGE
gm004777_Glyma0 AASADSVMST---KTEPIVCFTARQSQS--NISFSGVT-KDSAGDYQDCGASSM-LLMGE
                 .**** *:    : :. :* . : .:*  .:****:. :..*.*.*** .**:  *  *

AT5G48250.1     PQPWCHPTAQDIIASSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRF
Sb003468_Sorbi1 P-PWQPPGPE---GSIAGGSRDSAITRYKEKKKRRKFDKKIRYASRKARADVRKRVKGRF
pt017260_POPTR_ P-PWCPPCPE---SPFSSANRSDAVMRYKEKKKTRMFEKKVRYASRKARADVRRRVKGRF
gm004777_Glyma0 P-PWCPPCPE---SSLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRKRVKGRF
                * **  * .:   ..  . .*..*: ******* * *:*::**.*** *****:******

AT5G48250.1     VKSGEAYDYDPMSPTRSY
Sb003468_Sorbi1 VKVGEAYDYDPLCQTRSY
pt017260_POPTR_ VKAGEAYDYDPLSQTRSF
gm004777_Glyma0 VKAGDVYDYDPLNQTRSY
                ** *:.*****:  ***:
BoxShade v3.31 C (beta, 970507) Output
AT5G48250.1     M G Y M C D F C G E Q R S M V Y C R S D A A C L C L S C D R N V H S A N A L S K R H S R T L V C E R C N A Q P A S V R C
Sb003468_Sorbi1    M G A L C D F C G E Q R S M V Y C R S D A A S L C L S C D R N V H S A N A L S R R H T R T L L C D R C A S Q P A M V R C
pt017260_POPTR_    M G Y V C D F C G E Q R S M V Y C R S D A A S L C L S C D R N V H S A N A L S K R H S R T L L C E R C N S Q P A L V R C
gm004777_Glyma0    M G Y L C D F C G D Q R S L V Y C R S D S A C L C L S C D R N V H S A N A L S R R H S R T L V C E R C N S Q P A F V R S
 
AT5G48250.1     S D E R V S L C Q N C D W S G H D G K N S T T T S H H K R Q T I N C Y S G C P S S A E L S S I W S F C M D L N I S S A E
Sb003468_Sorbi1    L A E N A S L C Q N C D W N G H I - - A G S S A A G H K R Q T I N C Y S G C P S S A E L S R I W S F V S D - - I P N V A
pt017260_POPTR_    A E E R I S L C Q N C D W I G H G - - T S T S A S T H R R Q T I N S Y S G C P S A S E L S S I W S F V L D - - F P S R G
gm004777_Glyma0    V E E K I S L C Q N C D W L G H G - - T S P S S S M H K R Q S I N C Y S G C P S A A E F S S I W S F F L D - - I P S L G
 
AT5G48250.1     - E S A C E Q G M G L M T I D E D G T - - - - - - - - - - - G E K - - - - - S G V Q K I N V E Q - - - - - - - - - - - -
Sb003468_Sorbi1    P E P N C E Q G I S M M S I S D S G V S - - - - S Q D N A A G D N N L L D I A S E T L I S D L G T C D K P - - L V G S S
pt017260_POPTR_    - E S T C E Q E L G L M S I A E N S T T D S W G P T E N T I G Q N - - - - A S G V V E V N D R R E I A K S G V W L G S S
gm004777_Glyma0    - E A - C E Q E L G L M S I N E N I - - - - - - P P E - - - G Q N - - - - V S G S T E V T D L P S K G K S - - W A G T P
 
AT5G48250.1     - - P E T S S A A Q G M D H S S V P E N S S M A K - - - - - - - - E L G V C E - D D F N G N L I S D E V D L A L E N Y E
Sb003468_Sorbi1    S G A G V N L L P L A T D Q T A G S V D S P P D K V P Y T P - - - D K D M F S K D S I Y E D F C V D D V D L A F E N Y E
pt017260_POPTR_    S I P E S S S V P N N L D Q T T R S A N T S L P K - - - - - - - - - - - - - - - - - - - - D F N M D E M D L S L E N Y E
gm004777_Glyma0    S I P E S S S E P R I L D Q P P G P A N E C V P K L - Y C P G K K A S G I C E D D D L Y D D F I M D E V D L E L E N Y E
 
AT5G48250.1     E L F G S A F N S S R Y L F E H G G I G S L F E - K D E A - - - - - - - - - - - - - H E G S M Q - - - - - - Q P A L S N
Sb003468_Sorbi1    E L F G T S H I Q T E Q L F D D A G I D S Y F E V K E A P - - A G N S T - - - - - - E Q S K L K - - - - - - Q P A N S N
pt017260_POPTR_    E L F G V T L N N S E E L L E N G G I D S L F G T K D M S - - - - - - - - - - - - - - - - - - - - V V N A V Q P A S S N
gm004777_Glyma0    E L F G M A L S H S E E L F E N G G I N S L F E A K D M S A S A G D S H C Q G A V A A E G S S A G L V N P I Q P A C S N
 
AT5G48250.1     N A S A D S F M T C - - - R T E P I I C Y S S K P A H S - - N I S F S G I T G E S N A G D F Q D C G A S S M K Q L S R E
Sb003468_Sorbi1    A V S A D S G M S N P G V K G D S S V C I P L R Q A R S S L S L S F S G L T G E S S A G D H Q D C V V S S L - L L M G E
pt017260_POPTR_    A A S A D S M M S N - - - K T E P I L C F T E K Q G H S - - S L S F S G L N V E S S A A D Y Q D C G A S S M - L L M G E
gm004777_Glyma0    A A S A D S V M S T - - - K T E P I V C F T A R Q S Q S - - N I S F S G V T - K D S A G D Y Q D C G A S S M - L L M G E
 
AT5G48250.1     P Q P W C H P T A Q D I I A S S H A T T R N N A V M R Y K E K K K A R K F D K R V R Y V S R K E R A D V R R R V K G R F
Sb003468_Sorbi1    P - P W Q P P G P E - - - G S I A G G S R D S A I T R Y K E K K K R R K F D K K I R Y A S R K A R A D V R K R V K G R F
pt017260_POPTR_    P - P W C P P C P E - - - S P F S S A N R S D A V M R Y K E K K K T R M F E K K V R Y A S R K A R A D V R R R V K G R F
gm004777_Glyma0    P - P W C P P C P E - - - S S L H S A N R S N A V M R Y K E K K K T R K F E K K V R Y A S R K A R A D V R K R V K G R F
 
AT5G48250.1     V K S G E A Y D Y D P M S P T R S Y
Sb003468_Sorbi1    V K V G E A Y D Y D P L C Q T R S Y
pt017260_POPTR_    V K A G E A Y D Y D P L S Q T R S F
gm004777_Glyma0    V K A G D V Y D Y D P L N Q T R S Y
 
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