fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm007081 not found in 648aa AT5G48250.1 1st_1st 0.2 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G48250.1     ------------------------MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSAN
Sm007081_Selmo1 KRRFSTQVQERSRNSSREGKAGTLMERPCDFCGDERATVYCKADAALLCLSCDRNVHDAN
                                        *   *****::*: ***::*** **********.**

AT5G48250.1     ALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYS
Sm007081_Selmo1 ALSRRHSRTLVCDMCVVQPAVVRCGAESKAFCQACDGKRHAEYRAM---HHKRRAIVSYT
                ***:********: * .*** ***. *  ::** ** . *   .:    ****::* .*:

AT5G48250.1     GCPSSAELSSIW----------------------SFCMDL-------------------N
Sm007081_Selmo1 GCPSSAELARLWYCDVSDEPGGNGSGNGSGKGSTSKCLETFQGWVPASSQSQQQLHHPST
                ********: :*                      * *::                    .

AT5G48250.1     ISSAEESACEQGMGLMTID----EDGTGEKSGVQKINVEQ---------PETSSA-----
Sm007081_Selmo1 PQSREKKIFQQ---LMILQNRPPQQGLGHQQREKAITQAQTLMPPPPPRPSTSSSNGVAE
                 .* *:.  :*   ** ::    ::* *.:.  : *.  *         *.***:     

AT5G48250.1     -----AQGMDH--SSVPENSSM---------------------AKELGVCEDDFNGNLIS
Sm007081_Selmo1 IQYQTAQLGLHSPSSKPESGEIFPQQGENAWKAASPDQQLWNNAQDMGI--DDICKALTA
                     **   *  ** **...:                     *:::*:  **:   * :

AT5G48250.1     DEVDLALENYEELFGSAFNSSRYLFEHGGIGSLFEKDEAHEGSMQQPALSNNASADSFMT
Sm007081_Selmo1 DDVNV-FDNYEDLFLSAQDAAGTPFQDIGIACPSMAPAMSSKSMQN-GCSSMDTANSLQS
                *:*:: ::***:** ** :::   *:. **..        . ***: . *.  :*:*: :

AT5G48250.1     ------CRTEPI--------ICYSSKPAHSNISFSGITGESNAGDFQDCGAS--SMKQLS
Sm007081_Selmo1 DASESACRG-PFHPAAAAGNVQFSPRPACS----SGVSGDSSGTEYADCASVFYSAGEL-
                      **  *:        : :*.:** *    **::*:*.. :: **.:   *  :* 

AT5G48250.1     REPQPWCHPTAQDIIASSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKG
Sm007081_Selmo1 -----W-SSTSSDPAAASEA--RGNAMLRYKEKRKTRKYEKRIRYESRKTRADTRRRIKG
                     *  .*:.*  *:*.*  *.**::*****:*:**::**:** *** ***.***:**

AT5G48250.1     RFVKSGEAYDYDPMSPTRSY
Sm007081_Selmo1 RFVKAGQVYDYDPLSTTRSY
                ****:*:.*****:*.****
BoxShade v3.31 C (beta, 970507) Output
AT5G48250.1     - - - - - - - - - - - - - - - - - - - - - - - - M G Y M C D F C G E Q R S M V Y C R S D A A C L C L S C D R N V H S A N
Sm007081_Selmo1    K R R F S T Q V Q E R S R N S S R E G K A G T L M E R P C D F C G D E R A T V Y C K A D A A L L C L S C D R N V H D A N
 
AT5G48250.1     A L S K R H S R T L V C E R C N A Q P A S V R C S D E R V S L C Q N C D W S G H D G K N S T T T S H H K R Q T I N C Y S
Sm007081_Selmo1    A L S R R H S R T L V C D M C V V Q P A V V R C G A E S K A F C Q A C D G K R H A E Y R A M - - - H H K R R A I V S Y T
 
AT5G48250.1     G C P S S A E L S S I W - - - - - - - - - - - - - - - - - - - - - - S F C M D L - - - - - - - - - - - - - - - - - - - N
Sm007081_Selmo1    G C P S S A E L A R L W Y C D V S D E P G G N G S G N G S G K G S T S K C L E T F Q G W V P A S S Q S Q Q Q L H H P S T
 
AT5G48250.1     I S S A E E S A C E Q G M G L M T I D - - - - E D G T G E K S G V Q K I N V E Q - - - - - - - - - P E T S S A - - - - -
Sm007081_Selmo1    P Q S R E K K I F Q Q - - - L M I L Q N R P P Q Q G L G H Q Q R E K A I T Q A Q T L M P P P P P R P S T S S S N G V A E
 
AT5G48250.1     - - - - - A Q G M D H - - S S V P E N S S M - - - - - - - - - - - - - - - - - - - - - A K E L G V C E D D F N G N L I S
Sm007081_Selmo1    I Q Y Q T A Q L G L H S P S S K P E S G E I F P Q Q G E N A W K A A S P D Q Q L W N N A Q D M G I - - D D I C K A L T A
 
AT5G48250.1     D E V D L A L E N Y E E L F G S A F N S S R Y L F E H G G I G S L F E K D E A H E G S M Q Q P A L S N N A S A D S F M T
Sm007081_Selmo1    D D V N V - F D N Y E D L F L S A Q D A A G T P F Q D I G I A C P S M A P A M S S K S M Q N - G C S S M D T A N S L Q S
 
AT5G48250.1     - - - - - - C R T E P I - - - - - - - - I C Y S S K P A H S N I S F S G I T G E S N A G D F Q D C G A S - - S M K Q L S
Sm007081_Selmo1    D A S E S A C R G - P F H P A A A A G N V Q F S P R P A C S - - - - S G V S G D S S G T E Y A D C A S V F Y S A G E L -
 
AT5G48250.1     R E P Q P W C H P T A Q D I I A S S H A T T R N N A V M R Y K E K K K A R K F D K R V R Y V S R K E R A D V R R R V K G
Sm007081_Selmo1    - - - - - W - S S T S S D P A A A S E A - - R G N A M L R Y K E K R K T R K Y E K R I R Y E S R K T R A D T R R R I K G
 
AT5G48250.1     R F V K S G E A Y D Y D P M S P T R S Y
Sm007081_Selmo1    R F V K A G Q V Y D Y D P L S T T R S Y
 
0