fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017260 not found in 379aa AT5G48250.1 1st_1st 0.546938775 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G48250.1     MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC
pt017260_POPTR_ MGYVCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSQPALVRC
                ***:******************.***********************:*****:*** ***

AT5G48250.1     SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE
pt017260_POPTR_ AEERISLCQNCDWIGHG--TSTSASTHRRQTINSYSGCPSASELSSIWSFVLDF--PSRG
                ::**:******** **.  .**::* *:*****.******::******** :*:  .*  

AT5G48250.1     ESACEQGMGLMTIDEDGTGEK------------SGVQKINVEQ--------------PET
pt017260_POPTR_ ESTCEQELGLMSIAENSTTDSWGPTENTIGQNASGVVEVNDRREIAKSGVWLGSSSIPES
                **:*** :***:* *:.* :.            *** ::* .:              **:

AT5G48250.1     SSAAQGMDHSSVPENSSMAKELGVCEDDFNGNLISDEVDLALENYEELFGSAFNSSRYLF
pt017260_POPTR_ SSVPNNLDQTTRSANTSLPK-------DFN----MDEMDLSLENYEELFGVTLNNSEELL
                **..:.:*::: . *:*:.*       ***     **:**:********* ::*.*. *:

AT5G48250.1     EHGGIGSLFEKDEAHEGSMQQPALSNNASADSFMTCRTEPIICYSSKPAHSNISFSGITG
pt017260_POPTR_ ENGGIDSLFGTKDMSVVNAVQPASSNAASADSMMSNKTEPILCFTEKQGHSSLSFSGLNV
                *:***.*** ..:    .  *** ** *****:*: :****:*::.* .**.:****:. 

AT5G48250.1     ESNAGDFQDCGASSMKQLSREPQPWCHPTAQDIIASSHATTRNNAVMRYKEKKKARKFDK
pt017260_POPTR_ ESSAADYQDCGASSM-LLMGEP-PWCPPCPESPFSSAN---RSDAVMRYKEKKKTRMFEK
                **.*.*:********  *  ** *** * .:. ::*::   *.:**********:* *:*

AT5G48250.1     RVRYVSRKERADVRRRVKGRFVKSGEAYDYDPMSPTRSY
pt017260_POPTR_ KVRYASRKARADVRRRVKGRFVKAGEAYDYDPLSQTRSF
                :***.*** **************:********:* ***:
BoxShade v3.31 C (beta, 970507) Output
AT5G48250.1     M G Y M C D F C G E Q R S M V Y C R S D A A C L C L S C D R N V H S A N A L S K R H S R T L V C E R C N A Q P A S V R C
pt017260_POPTR_    M G Y V C D F C G E Q R S M V Y C R S D A A S L C L S C D R N V H S A N A L S K R H S R T L L C E R C N S Q P A L V R C
 
AT5G48250.1     S D E R V S L C Q N C D W S G H D G K N S T T T S H H K R Q T I N C Y S G C P S S A E L S S I W S F C M D L N I S S A E
pt017260_POPTR_    A E E R I S L C Q N C D W I G H G - - T S T S A S T H R R Q T I N S Y S G C P S A S E L S S I W S F V L D F - - P S R G
 
AT5G48250.1     E S A C E Q G M G L M T I D E D G T G E K - - - - - - - - - - - - S G V Q K I N V E Q - - - - - - - - - - - - - - P E T
pt017260_POPTR_    E S T C E Q E L G L M S I A E N S T T D S W G P T E N T I G Q N A S G V V E V N D R R E I A K S G V W L G S S S I P E S
 
AT5G48250.1     S S A A Q G M D H S S V P E N S S M A K E L G V C E D D F N G N L I S D E V D L A L E N Y E E L F G S A F N S S R Y L F
pt017260_POPTR_    S S V P N N L D Q T T R S A N T S L P K - - - - - - - D F N - - - - M D E M D L S L E N Y E E L F G V T L N N S E E L L
 
AT5G48250.1     E H G G I G S L F E K D E A H E G S M Q Q P A L S N N A S A D S F M T C R T E P I I C Y S S K P A H S N I S F S G I T G
pt017260_POPTR_    E N G G I D S L F G T K D M S V V N A V Q P A S S N A A S A D S M M S N K T E P I L C F T E K Q G H S S L S F S G L N V
 
AT5G48250.1     E S N A G D F Q D C G A S S M K Q L S R E P Q P W C H P T A Q D I I A S S H A T T R N N A V M R Y K E K K K A R K F D K
pt017260_POPTR_    E S S A A D Y Q D C G A S S M - L L M G E P - P W C P P C P E S P F S S A N - - - R S D A V M R Y K E K K K T R M F E K
 
AT5G48250.1     R V R Y V S R K E R A D V R R R V K G R F V K S G E A Y D Y D P M S P T R S Y
pt017260_POPTR_    K V R Y A S R K A R A D V R R R V K G R F V K A G E A Y D Y D P L S Q T R S F
 
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