fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003468 not found in 406aa AT5G48250.1 1st_1st 0.442176870 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G48250.1     MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC
Sb003468_Sorbi1 MGALCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLCDRCASQPAMVRC
                ** :******************.****************:**:***:*:** :*** ***

AT5G48250.1     SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDL-NISSA
Sb003468_Sorbi1 LAENASLCQNCDWNGHIAGSS--AAGHKRQTINCYSGCPSSAELSRIWSFVSDIPNV--A
                  *..********.** . .*  :: ******************* ****  *: *:  *

AT5G48250.1     EESACEQGMGLMTIDEDG--------------------------------TGEKSGVQKI
Sb003468_Sorbi1 PEPNCEQGISMMSISDSGVSSQDNAAGDNNLLDIASETLISDLGTCDKPLVGSSSGA-GV
                 *. ****:.:*:*.:.*                                .*..**.  :

AT5G48250.1     NVEQPETSSAAQGMDHSS-----VPENSSMAKELGVCEDDFNGNLISDEVDLALENYEEL
Sb003468_Sorbi1 NLLPLATDQTAGSVDSPPDKVPYTPDKDMFSKD-SIYED-----FCVDDVDLAFENYEEL
                *:    *..:* .:* ..     .*::. ::*: .: **     :  *:****:******

AT5G48250.1     FGSAFNSSRYLFEHGGIGSLFEKDEAHEGS------MQQPALSNNASADSFMT---CRTE
Sb003468_Sorbi1 FGTSHIQTEQLFDDAGIDSYFEVKEAPAGNSTEQSKLKQPANSNAVSADSGMSNPGVKGD
                **::. .:. **:..**.* ** .**  *.      ::*** ** .**** *:    : :

AT5G48250.1     PIICYSSKPAHS--NISFSGITGESNAGDFQDCGASSMKQLSREPQPWCHPTAQDIIASS
Sb003468_Sorbi1 SSVCIPLRQARSSLSLSFSGLTGESSAGDHQDCVVSSL-LLMGEP-PWQPPGPEGSIAGG
                . :* . : *:*  .:****:****.***.*** .**:  *  ** **  * .:. **..

AT5G48250.1     HATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYDPMSPTR
Sb003468_Sorbi1 ---SRDSAITRYKEKKKRRKFDKKIRYASRKARADVRKRVKGRFVKVGEAYDYDPLCQTR
                   :*:.*: ******* *****::**.*** *****:******** ********:. **

AT5G48250.1     SY
Sb003468_Sorbi1 SY
                **
BoxShade v3.31 C (beta, 970507) Output
AT5G48250.1     M G Y M C D F C G E Q R S M V Y C R S D A A C L C L S C D R N V H S A N A L S K R H S R T L V C E R C N A Q P A S V R C
Sb003468_Sorbi1    M G A L C D F C G E Q R S M V Y C R S D A A S L C L S C D R N V H S A N A L S R R H T R T L L C D R C A S Q P A M V R C
 
AT5G48250.1     S D E R V S L C Q N C D W S G H D G K N S T T T S H H K R Q T I N C Y S G C P S S A E L S S I W S F C M D L - N I S S A
Sb003468_Sorbi1    L A E N A S L C Q N C D W N G H I A G S S - - A A G H K R Q T I N C Y S G C P S S A E L S R I W S F V S D I P N V - - A
 
AT5G48250.1     E E S A C E Q G M G L M T I D E D G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T G E K S G V Q K I
Sb003468_Sorbi1    P E P N C E Q G I S M M S I S D S G V S S Q D N A A G D N N L L D I A S E T L I S D L G T C D K P L V G S S S G A - G V
 
AT5G48250.1     N V E Q P E T S S A A Q G M D H S S - - - - - V P E N S S M A K E L G V C E D D F N G N L I S D E V D L A L E N Y E E L
Sb003468_Sorbi1    N L L P L A T D Q T A G S V D S P P D K V P Y T P D K D M F S K D - S I Y E D - - - - - F C V D D V D L A F E N Y E E L
 
AT5G48250.1     F G S A F N S S R Y L F E H G G I G S L F E K D E A H E G S - - - - - - M Q Q P A L S N N A S A D S F M T - - - C R T E
Sb003468_Sorbi1    F G T S H I Q T E Q L F D D A G I D S Y F E V K E A P A G N S T E Q S K L K Q P A N S N A V S A D S G M S N P G V K G D
 
AT5G48250.1     P I I C Y S S K P A H S - - N I S F S G I T G E S N A G D F Q D C G A S S M K Q L S R E P Q P W C H P T A Q D I I A S S
Sb003468_Sorbi1    S S V C I P L R Q A R S S L S L S F S G L T G E S S A G D H Q D C V V S S L - L L M G E P - P W Q P P G P E G S I A G G
 
AT5G48250.1     H A T T R N N A V M R Y K E K K K A R K F D K R V R Y V S R K E R A D V R R R V K G R F V K S G E A Y D Y D P M S P T R
Sb003468_Sorbi1    - - - S R D S A I T R Y K E K K K R R K F D K K I R Y A S R K A R A D V R K R V K G R F V K V G E A Y D Y D P L C Q T R
 
AT5G48250.1     S Y
Sb003468_Sorbi1    S Y
 
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