fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003468 not found in 406aa AT5G48250.1 1st_1st 0.442176870 Ia
Sb027740 HLQQTSLNLALLPEMG in 298/747 AT3G07650.4 not_not 0.442176870 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G48250.1     ------------MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVC
Sb003468_Sorbi1 ------------MGALCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSRRHTRTLLC
Sb027740_Sorbi1 TASGISQILSRIMASLCDFCGKQRSMIYCRSDAASLCLSCDRNVHSANALSRRHTRTLLC
                            *. :*****:****:*******.****************:**:***:*

AT5G48250.1     ERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIW
Sb003468_Sorbi1 DRCASQPAMVRCLAENASLCQNCDWNGHIA--GSSAAGHKRQTINCYSGCPSSAELSRIW
Sb027740_Sorbi1 DRCGSQPASVRCLEDNASLCQNCDWNGHDA--ASGASGHKRQAINCYSGCPSSAELSRIW
                :** :*** ***  :..********.** .  .: :: ****:************** **

AT5G48250.1     SFCMDLNISSAEESACEQGMGLMTIDE-------DGTGEKSGVQKINVE-----------
Sb003468_Sorbi1 SFVSDIPNVAPEPN-CEQGISMMSISDSGVSSQDNAAGDNNLLDIASETLISDLGTCD--
Sb027740_Sorbi1 SFIMDIPTVPAEPN-CEDGLSMMTIDDSDVTNHHDASDDKRLLEIANTTLMSDPPSADKP
                **  *:   ..* . **:*:.:*:*.:       :.:.::  ::  .             

AT5G48250.1     QP-ETSSAAQGMDH------------SSVPENSSMAKELGVCEDDFN-----GNLISDEV
Sb003468_Sorbi1 KPLVGSSSGAGVNLLPLATDQTAGSVDSPPDKVPYTPD----KDMFSKDSIYEDFCVDDV
Sb027740_Sorbi1 KPLISSSSGDGFDVLPLATDQPAGSVSVTP-KVPYARD----DDNFN-DGMYEDLCVDDA
                :*   **:. *.:             .  * : . : :    .* *.      ::  *:.

AT5G48250.1     DLALENYEELFGSAFNSSRYLFEHGGIGSLFEKDEA------HEGSMQQPALSNNASADS
Sb003468_Sorbi1 DLAFENYEELFGTSHIQTEQLFDDAGIDSYFEVKEAPAGNSTEQSKLKQPANSNAVSADS
Sb027740_Sorbi1 DMTFENYEELFGTSHIRTEELFDDAGIDSYFEMKETQPFDFNEEPKTMQLECSNVVSADC
                *:::********::.  :. **:..**.* ** .*:      .: .  *   ** .***.

AT5G48250.1     FMT---CRTEPIICYSSKPAHSNI--SFSGITGESNAGDFQDCGASSMKQLSREPQPWCH
Sb003468_Sorbi1 GMSNPGVKGDSSVCIPLRQARSSLSLSFSGLTGESSAGDHQDCVVSSL-LLMGEP-PWQP
Sb027740_Sorbi1 GMLNPGARADSSLCIPVRQVRSSISHSLSGLTGESSAGDHQDCGVSPM-LLMGEP-PWHS
                 *     : :. :* . : .:*.:  *:**:****.***.*** .*.:  *  ** **  

AT5G48250.1     PTAQDIIASSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEA
Sb003468_Sorbi1 PGPEGSIAGG---SRDSAITRYKEKKKRRKFDKKIRYASRKARADVRKRVKGRFVKVGEA
Sb027740_Sorbi1 PGPEGSVAGG---SRDSALTRYKEKKKRRKFDKKIRYASRKARADVRKRVKGRFIKAGEA
                * .:. :*..   :*:.*: ******* *****::**.*** *****:******:* ***

AT5G48250.1     YDYDPMSPTRSY
Sb003468_Sorbi1 YDYDPLCQTRSY
Sb027740_Sorbi1 YDYDPLSQTRSY
                *****:. ****
BoxShade v3.31 C (beta, 970507) Output
AT5G48250.1     - - - - - - - - - - - - M G Y M C D F C G E Q R S M V Y C R S D A A C L C L S C D R N V H S A N A L S K R H S R T L V C
Sb003468_Sorbi1    - - - - - - - - - - - - M G A L C D F C G E Q R S M V Y C R S D A A S L C L S C D R N V H S A N A L S R R H T R T L L C
Sb027740_Sorbi1    T A S G I S Q I L S R I M A S L C D F C G K Q R S M I Y C R S D A A S L C L S C D R N V H S A N A L S R R H T R T L L C
 
AT5G48250.1     E R C N A Q P A S V R C S D E R V S L C Q N C D W S G H D G K N S T T T S H H K R Q T I N C Y S G C P S S A E L S S I W
Sb003468_Sorbi1    D R C A S Q P A M V R C L A E N A S L C Q N C D W N G H I A - - G S S A A G H K R Q T I N C Y S G C P S S A E L S R I W
Sb027740_Sorbi1    D R C G S Q P A S V R C L E D N A S L C Q N C D W N G H D A - - A S G A S G H K R Q A I N C Y S G C P S S A E L S R I W
 
AT5G48250.1     S F C M D L N I S S A E E S A C E Q G M G L M T I D E - - - - - - - D G T G E K S G V Q K I N V E - - - - - - - - - - -
Sb003468_Sorbi1    S F V S D I P N V A P E P N - C E Q G I S M M S I S D S G V S S Q D N A A G D N N L L D I A S E T L I S D L G T C D - -
Sb027740_Sorbi1    S F I M D I P T V P A E P N - C E D G L S M M T I D D S D V T N H H D A S D D K R L L E I A N T T L M S D P P S A D K P
 
AT5G48250.1     Q P - E T S S A A Q G M D H - - - - - - - - - - - - S S V P E N S S M A K E L G V C E D D F N - - - - - G N L I S D E V
Sb003468_Sorbi1    K P L V G S S S G A G V N L L P L A T D Q T A G S V D S P P D K V P Y T P D - - - - K D M F S K D S I Y E D F C V D D V
Sb027740_Sorbi1    K P L I S S S S G D G F D V L P L A T D Q P A G S V S V T P - K V P Y A R D - - - - D D N F N - D G M Y E D L C V D D A
 
AT5G48250.1     D L A L E N Y E E L F G S A F N S S R Y L F E H G G I G S L F E K D E A - - - - - - H E G S M Q Q P A L S N N A S A D S
Sb003468_Sorbi1    D L A F E N Y E E L F G T S H I Q T E Q L F D D A G I D S Y F E V K E A P A G N S T E Q S K L K Q P A N S N A V S A D S
Sb027740_Sorbi1    D M T F E N Y E E L F G T S H I R T E E L F D D A G I D S Y F E M K E T Q P F D F N E E P K T M Q L E C S N V V S A D C
 
AT5G48250.1     F M T - - - C R T E P I I C Y S S K P A H S N I - - S F S G I T G E S N A G D F Q D C G A S S M K Q L S R E P Q P W C H
Sb003468_Sorbi1    G M S N P G V K G D S S V C I P L R Q A R S S L S L S F S G L T G E S S A G D H Q D C V V S S L - L L M G E P - P W Q P
Sb027740_Sorbi1    G M L N P G A R A D S S L C I P V R Q V R S S I S H S L S G L T G E S S A G D H Q D C G V S P M - L L M G E P - P W H S
 
AT5G48250.1     P T A Q D I I A S S H A T T R N N A V M R Y K E K K K A R K F D K R V R Y V S R K E R A D V R R R V K G R F V K S G E A
Sb003468_Sorbi1    P G P E G S I A G G - - - S R D S A I T R Y K E K K K R R K F D K K I R Y A S R K A R A D V R K R V K G R F V K V G E A
Sb027740_Sorbi1    P G P E G S V A G G - - - S R D S A L T R Y K E K K K R R K F D K K I R Y A S R K A R A D V R K R V K G R F I K A G E A
 
AT5G48250.1     Y D Y D P M S P T R S Y
Sb003468_Sorbi1    Y D Y D P L C Q T R S Y
Sb027740_Sorbi1    Y D Y D P L S Q T R S Y
 
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