fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040302 not found in 411aa AT5G48250.1 not_1st 0.526530612 II
Gm040301 not found in 411aa AT5G48250.1 not_1st 0.526530612 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G48250.1     MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC
gm040301_Glyma1 MGYLCDFCGDQRSLVYCRSDAACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAFVRC
gm040302_Glyma1 MGYLCDFCGDQRSLVYCRSDAACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAFVRC
                ***:*****:***:*************************:************:*** ***

AT5G48250.1     SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE
gm040301_Glyma1 VDEKISLCQNCDWLGHG--TSPSSSTHKRQSINCYSGCPSAAEFSSIWSFFLD--IPSMG
gm040302_Glyma1 VDEKISLCQNCDWLGHG--TSPSSSTHKRQSINCYSGCPSAAEFSSIWSFFLD--IPSMG
                 **::******** **.  .*.::* ****:*********:**:****** :*  *.*  

AT5G48250.1     ESACEQGMGLMTIDED---------------GTGE--------KSGVQKINVEQPETSSA
gm040301_Glyma1 E-ACEQELGLMSINENSNKNAWASPEGQNVSGSAEVTDLPSKGKSWAGTSSV--PESSSE
gm040302_Glyma1 E-ACEQELGLMSINENSNKNAWASPEGQNVSGSAEVTDLPSKGKSWAGTSSV--PESSSE
                * **** :***:*:*:               *:.*        ** . . .*  **:** 

AT5G48250.1     AQGMDHSSVPENSSMAKEL-------GVCE-DDFNGNLISDEVDLALENYEELFGSAFNS
gm040301_Glyma1 PRILDQPPGPANECMPKLYCPGKKVSGIYEDDDLYDDFIMDEVDLQLENYEELFGMALSH
gm040302_Glyma1 PRILDQPPGPANECMPKLYCPGKKVSGIYEDDDLYDDFIMDEVDLQLENYEELFGMALSH
                .: :*:.. * *..*.*         *: * **: .::* ***** ********* *:. 

AT5G48250.1     SRYLFEHGGIGSLFEKDE--------------AHEGSMQ------QPALSNNASADSFMT
gm040301_Glyma1 SEELFENGGINSLFETKDMSASAGDSHCQGAVAAEGSSAELVNAIQPACSNAASADSMMS
gm040302_Glyma1 SEELFENGGINSLFETKDMSASAGDSHCQGAVAAEGSSAELVNAIQPACSNAASADSMMS
                *. ***:***.****..:              * ***        *** ** *****:*:

AT5G48250.1     CRTEPIICYSSKPAHSNISFSGITGESNAGDFQDCGASSMKQLSREPQPWCHPTAQDIIA
gm040301_Glyma1 TKTEPIVCFTARQSLSNISFSGVTKDS-VGDYQDCGASSM-LLMGEP-PWCPPCPE---S
gm040302_Glyma1 TKTEPIVCFTARQSLSNISFSGVTKDS-VGDYQDCGASSM-LLMGEP-PWCPPCPE---S
                 :****:*:::: : *******:* :* .**:********  *  ** *** * .:   :

AT5G48250.1     SSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYDPMSP
gm040301_Glyma1 SLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRKRVKGRFVKAGDVYDYDPLNQ
gm040302_Glyma1 SLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRKRVKGRFVKAGDVYDYDPLNQ
                * *::.*.***********:***:*:***.*** *****:********:*:.*****:. 

AT5G48250.1     TRSY
gm040301_Glyma1 TRSC
gm040302_Glyma1 TRSC
                ***
BoxShade v3.31 C (beta, 970507) Output
AT5G48250.1     M G Y M C D F C G E Q R S M V Y C R S D A A C L C L S C D R N V H S A N A L S K R H S R T L V C E R C N A Q P A S V R C
gm040301_Glyma1    M G Y L C D F C G D Q R S L V Y C R S D A A C L C L S C D R N V H S A N A L S R R H S R T L V C E R C N S Q P A F V R C
gm040302_Glyma1    M G Y L C D F C G D Q R S L V Y C R S D A A C L C L S C D R N V H S A N A L S R R H S R T L V C E R C N S Q P A F V R C
 
AT5G48250.1     S D E R V S L C Q N C D W S G H D G K N S T T T S H H K R Q T I N C Y S G C P S S A E L S S I W S F C M D L N I S S A E
gm040301_Glyma1    V D E K I S L C Q N C D W L G H G - - T S P S S S T H K R Q S I N C Y S G C P S A A E F S S I W S F F L D - - I P S M G
gm040302_Glyma1    V D E K I S L C Q N C D W L G H G - - T S P S S S T H K R Q S I N C Y S G C P S A A E F S S I W S F F L D - - I P S M G
 
AT5G48250.1     E S A C E Q G M G L M T I D E D - - - - - - - - - - - - - - - G T G E - - - - - - - - K S G V Q K I N V E Q P E T S S A
gm040301_Glyma1    E - A C E Q E L G L M S I N E N S N K N A W A S P E G Q N V S G S A E V T D L P S K G K S W A G T S S V - - P E S S S E
gm040302_Glyma1    E - A C E Q E L G L M S I N E N S N K N A W A S P E G Q N V S G S A E V T D L P S K G K S W A G T S S V - - P E S S S E
 
AT5G48250.1     A Q G M D H S S V P E N S S M A K E L - - - - - - - G V C E - D D F N G N L I S D E V D L A L E N Y E E L F G S A F N S
gm040301_Glyma1    P R I L D Q P P G P A N E C M P K L Y C P G K K V S G I Y E D D D L Y D D F I M D E V D L Q L E N Y E E L F G M A L S H
gm040302_Glyma1    P R I L D Q P P G P A N E C M P K L Y C P G K K V S G I Y E D D D L Y D D F I M D E V D L Q L E N Y E E L F G M A L S H
 
AT5G48250.1     S R Y L F E H G G I G S L F E K D E - - - - - - - - - - - - - - A H E G S M Q - - - - - - Q P A L S N N A S A D S F M T
gm040301_Glyma1    S E E L F E N G G I N S L F E T K D M S A S A G D S H C Q G A V A A E G S S A E L V N A I Q P A C S N A A S A D S M M S
gm040302_Glyma1    S E E L F E N G G I N S L F E T K D M S A S A G D S H C Q G A V A A E G S S A E L V N A I Q P A C S N A A S A D S M M S
 
AT5G48250.1     C R T E P I I C Y S S K P A H S N I S F S G I T G E S N A G D F Q D C G A S S M K Q L S R E P Q P W C H P T A Q D I I A
gm040301_Glyma1    T K T E P I V C F T A R Q S L S N I S F S G V T K D S - V G D Y Q D C G A S S M - L L M G E P - P W C P P C P E - - - S
gm040302_Glyma1    T K T E P I V C F T A R Q S L S N I S F S G V T K D S - V G D Y Q D C G A S S M - L L M G E P - P W C P P C P E - - - S
 
AT5G48250.1     S S H A T T R N N A V M R Y K E K K K A R K F D K R V R Y V S R K E R A D V R R R V K G R F V K S G E A Y D Y D P M S P
gm040301_Glyma1    S L H S A N R S N A V M R Y K E K K K T R K F E K K V R Y A S R K A R A D V R K R V K G R F V K A G D V Y D Y D P L N Q
gm040302_Glyma1    S L H S A N R S N A V M R Y K E K K K T R K F E K K V R Y A S R K A R A D V R K R V K G R F V K A G D V Y D Y D P L N Q
 
AT5G48250.1     T R S Y
gm040301_Glyma1    T R S C
gm040302_Glyma1    T R S C
 
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