fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48670.1 NEQPQNLNLNLNQNYN at 232/321 in AT5G48670.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028831 not found in 288aa AT5G48670.1 1st_1st 0.221258134 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G48670.1     MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS
Sb028831_Sorbi1 MARKKVNLQWISNNATRRATYKRRSQGLEKKASELTTLCGIKLCVVVYGEGEAQPKVWPS
                *:****:* :***:::*:**:*:*.:** **. **:*****. *.::*.  :::*:****

AT5G48670.1     NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC
Sb028831_Sorbi1 DEEAKDLLMKFNNMLDVSSLKKTKNQEDFLHSRSLKLHEQVSKLELENRERETLDLLHDS
                :. .: :: :*..: ::.. **  :**.**:.*  *  * : : . :.** *  :::.:.

AT5G48670.1     LIGNM-EMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIP
Sb028831_Sorbi1 MYGERPSLIGTDKDELLSLRDMVEMKMRKIKARLQQL---------------VVGQGVLP
                : *:  .::  :  :* .*  *:*  ::.:: *:: *               ...:* :*

AT5G48670.1     MPNLVATTAPTTTIYEVGSSSSFAAVANFVNPIDLQQFRHPAAQHVGLNEQPQNLNLNLN
Sb028831_Sorbi1 QP------LPQT------QASS--------------------------------------
                 *       * *      .:**                                      

AT5G48670.1     QNYNQNQEWFMEMMNHPEQMRYQTEQMGYQFMDDNHHNHIHHQPQEHQHQIHDESSNALD
Sb028831_Sorbi1 --YTYNEEQRMSVLE-------------------------EHRPWQQDSRLANLAPNYSC
                  *. *:*  *.:::                         .*:* ::: :: : :.*   

AT5G48670.1     AANSSSIIPVTSSSITNKTWFH--------------
Sb028831_Sorbi1 PKAGSSSEPSSSGC----EMMHPYNLGTLSRPPSAR
                .  .**  * :*..      :*
BoxShade v3.31 C (beta, 970507) Output
AT5G48670.1     M T R K K V K L A Y I S N D S S R K A T F K K R K K G L M K K V H E L S T L C G I T A C A I I Y S P Y D T N P E V W P S
Sb028831_Sorbi1    M A R K K V N L Q W I S N N A T R R A T Y K R R S Q G L E K K A S E L T T L C G I K L C V V V Y G E G E A Q P K V W P S
 
AT5G48670.1     N S G V Q R V V S E F R T L P E M D Q H K K M V D Q E G F L K Q R I A K A T E T L R R Q R K D S R E L E M T E V M F Q C
Sb028831_Sorbi1    D E E A K D L L M K F N N M L D V S S L K K T K N Q E D F L H S R S L K L H E Q V S K L E L E N R E R E T L D L L H D S
 
AT5G48670.1     L I G N M - E M F H L N I V D L N D L G Y M I E Q Y L K D V N R R I E I L R N S G T E I G E S S S V A V A A S E G N I P
Sb028831_Sorbi1    M Y G E R P S L I G T D K D E L L S L R D M V E M K M R K I K A R L Q Q L - - - - - - - - - - - - - - - V V G Q G V L P
 
AT5G48670.1     M P N L V A T T A P T T T I Y E V G S S S S F A A V A N F V N P I D L Q Q F R H P A A Q H V G L N E Q P Q N L N L N L N
Sb028831_Sorbi1    Q P - - - - - - L P Q T - - - - - - Q A S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G48670.1     Q N Y N Q N Q E W F M E M M N H P E Q M R Y Q T E Q M G Y Q F M D D N H H N H I H H Q P Q E H Q H Q I H D E S S N A L D
Sb028831_Sorbi1    - - Y T Y N E E Q R M S V L E - - - - - - - - - - - - - - - - - - - - - - - - - E H R P W Q Q D S R L A N L A P N Y S C
 
AT5G48670.1     A A N S S S I I P V T S S S I T N K T W F H - - - - - - - - - - - - - -
Sb028831_Sorbi1    P K A G S S S E P S S S G C - - - - E M M H P Y N L G T L S R P P S A R
 
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